Alternatives and similar repositories for ggkegg

Users that are interested in ggkegg are comparing it to the libraries listed below

• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆209Updated 2 months ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆268Updated 9 months ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆248Updated this week
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆244Updated 2 weeks ago
• hbctraining / Intro-to-DGE
  ☆209Updated 3 months ago
• mixOmicsTeam / mixOmics
  Development repository for the Bioconductor package 'mixOmics '
  ☆221Updated 6 months ago
• PoisonAlien / trackplot
  Generate IGV style locus tracks from bigWig files in R
  ☆173Updated last year
• dzhang32 / ggtranscript
  Visualizing transcript structure and annotation using ggplot2
  ☆162Updated last year
• rpetit3 / fastq-dl
  Download FASTQ files from SRA or ENA repositories.
  ☆350Updated 5 months ago
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆190Updated 2 weeks ago
• ewels / sra-explorer
  Web application to explore the Sequence Read Archive.
  ☆217Updated 4 months ago
• iDEP-SDSU / idep
  Integrated Differential Expression and Pathway analysis
  ☆134Updated last week
• Lindseynicer / WGCNA_tutorial
  A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
  ☆72Updated 3 years ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆347Updated 5 months ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆112Updated this week
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆198Updated last year
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆225Updated last year
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated last month
• im3sanger / dndscv
  dN/dS methods to quantify selection in cancer and somatic evolution
  ☆229Updated 6 months ago
• tidyomics / tidyomics
  Easily install and load packages from the tidyomics ecosystem
  ☆70Updated 3 weeks ago
• CompEpigen / figeno
  Tool for plotting sequencing data along genomic coordinates.
  ☆321Updated 4 months ago
• biobakery / Maaslin2
  MaAsLin2: Microbiome Multivariate Association with Linear Models
  ☆150Updated last year
• hbctraining / Investigating-chromatin-biology-ChIPseq
  ☆99Updated last month
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆123Updated 6 months ago
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆95Updated last year
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆143Updated 3 weeks ago
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆127Updated last week
• al2na / methylKit
  R package for DNA methylation analysis
  ☆240Updated 2 months ago
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆423Updated last week