google / bestLinks
Bam Error Stats Tool (best): analysis of error types in aligned reads.
☆139Updated 11 months ago
Alternatives and similar repositories for best
Users that are interested in best are comparing it to the libraries listed below
Sorting:
- Per-base per-nucleotide depth analysis☆146Updated this week
- Command line utility for manipulating Illumina-generated FASTQ files.☆95Updated this week
- an API for intersections of genomic data☆142Updated last week
- Grep for FASTQ files☆103Updated last month
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Creating alignment plots from bam files☆107Updated this week
- long read RNA-seq quantification☆99Updated 3 weeks ago
- expressions on VCFs☆91Updated 9 months ago
- The D4 Quantitative Data Format☆169Updated 2 months ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆168Updated this week
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- bioinformatics toolkit in rust☆93Updated 4 months ago
- A high-performance BigWig and BigBed library in Rust☆113Updated 3 months ago
- ☆101Updated last year
- vcfdist: Accurately benchmarking phased variant calls☆84Updated 4 months ago
- A complete diploid human genome☆141Updated 4 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆121Updated 3 months ago
- RNA modifications detection from Nanopore dRNA-Seq data☆88Updated 3 weeks ago
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆133Updated this week
- Variant calling tool for long-read sequencing data☆117Updated 10 months ago
- reference-free transcriptome assembly for short and long reads☆108Updated 2 years ago
- BWT construction and search☆126Updated 3 weeks ago
- ClairS - a deep-learning method for long-read somatic small variant calling☆102Updated 2 weeks ago
- Tools for fiberseq data written in rust.☆63Updated this week
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆66Updated this week
- using all the bits for echt rapid variant annotation and filtering☆153Updated 10 months ago
- Fast and accurate coordinate conversion between assemblies☆118Updated 3 months ago
- sam2pairwise takes a SAM file and uses the CIGAR and MD tag to reconstruct the pairwise alignment of each read.☆44Updated 11 years ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆82Updated 2 weeks ago
- Fast FASTQ sample demultiplexing in Rust.☆66Updated this week