➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
☆595Jan 13, 2026Updated 5 months ago
Alternatives and similar repositories for gggenes
Users that are interested in gggenes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A grammar of graphics for comparative genomics☆770Feb 23, 2026Updated 4 months ago
- Creating plasmid maps inside ggplot.☆92Sep 2, 2025Updated 10 months ago
- Gene cluster comparison figure generator☆644Dec 22, 2025Updated 6 months ago
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆109Dec 11, 2023Updated 2 years ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆656May 15, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆334Jun 3, 2026Updated last month
- Find clustered hits from a BLAST search☆144Jan 16, 2026Updated 5 months ago
- Visualize and annotate genomic coverage with ggplot2☆271Jan 24, 2025Updated last year
- A list of interesting genome browser and genome visualization programs☆1,092Updated this week
- Visualization and annotation of phylogenetic trees☆928Apr 29, 2026Updated 2 months ago
- Tool to plot synteny and structural rearrangements between genomes☆348Apr 7, 2025Updated last year
- Synteny and Rearrangement Identifier☆474Updated this week
- Visualizing publication-quality multiple sequence alignment using ggplot2☆218Jun 9, 2026Updated 3 weeks ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆567Feb 14, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Easily add significance brackets to your ggplots☆614Mar 29, 2026Updated 3 months ago
- the pangenome graph builder☆506Mar 31, 2026Updated 3 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆293Nov 28, 2024Updated last year
- Rapid comparison and dereplication of genomes☆348Updated this week
- Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.☆201Jun 10, 2026Updated 3 weeks ago
- Create a tree using Mash distances☆188Oct 24, 2023Updated 2 years ago
- An updated pipeline for pangenome investigation☆363Updated this week
- Align proteins to genomes with splicing and frameshift☆405Jan 5, 2026Updated 6 months ago
- geNomad: Identification of mobile genetic elements☆319Mar 29, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Download FASTQ files from SRA or ENA repositories.☆392May 16, 2026Updated last month
- A genome visualization python package for comparative genomics☆412Jun 14, 2026Updated 3 weeks ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆372Jun 6, 2025Updated last year
- A genome completeness evaluation tool based on miniprot☆250Jun 20, 2026Updated 2 weeks ago
- Constructing a pangenome gene graph☆209Aug 11, 2025Updated 10 months ago
- Fast genome-wide functional annotation through orthology assignment☆749May 22, 2026Updated last month
- Read alignment statistics for metagenomics☆400Updated this week
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆424May 20, 2026Updated last month
- BEDOPS: high-performance genomic feature operations☆372Apr 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reorients assembled microbial sequences☆141Updated this week
- An accurate GFF3/GTF lift over pipeline☆546Aug 1, 2023Updated 2 years ago
- Fast Whole-Genome Similarity (ANI) Estimation☆468Dec 16, 2025Updated 6 months ago
- NCBI Prokaryotic Genome Annotation Pipeline☆379Jun 26, 2026Updated last week
- Build a partitioned pangenome graph from microbial genomes☆304Jun 26, 2026Updated last week
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,574Jun 24, 2026Updated last week
- Official home of genome aligner based upon notion of Cactus graphs☆690Jun 23, 2026Updated last week