TickingClock1992 / RIdeogramLinks
☆180Updated 4 years ago
Alternatives and similar repositories for RIdeogram
Users that are interested in RIdeogram are comparing it to the libraries listed below
Sorting:
- an R/shiny application for creation of Circos plot interactively☆157Updated 2 years ago
- Visualize and annotate genomic coverage with ggplot2☆262Updated 7 months ago
- web documentation for Trinotate☆48Updated 2 years ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆91Updated last year
- A library for running k-mers based GWAS☆115Updated 10 months ago
- Learning the Variant Call Format☆144Updated last month
- csf fork of fastqc for usage on selected reads of unaligned bam file☆48Updated 12 years ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Match up paired end fastq files quickly and efficiently.☆151Updated last year
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆93Updated 3 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆115Updated last year
- FEELnc : FlExible Extraction of LncRNA☆90Updated last month
- Visualizing transcript structure and annotation using ggplot2☆160Updated last year
- Nanopore data analysis in R☆40Updated 2 years ago
- Trinotate source code☆82Updated last year
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆120Updated last year
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- Statistical Analysis of Metagenomic Profiles☆93Updated 5 years ago
- Web application to explore the Sequence Read Archive.☆217Updated 2 months ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆106Updated 2 months ago
- Intervene: a tool for intersection and visualization of multiple genomic region and gene sets☆143Updated last year
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆73Updated 3 years ago
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- Command-line tool for the visualization of splicing events across multiple samples☆130Updated last year
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆187Updated 2 months ago
- Haplotype based scans for selection☆132Updated 3 weeks ago
- QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis☆80Updated 5 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year