A list of interesting genome browser and genome visualization programs
☆1,107Jul 21, 2026Updated 2 months ago
Alternatives and similar repositories for awesome-genome-visualization
Users that are interested in awesome-genome-visualization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A grammar of graphics for comparative genomics☆783Updated this week
- Plot structural variant signals from many BAMs and CRAMs☆573Jul 13, 2024Updated 2 years ago
- Synteny and Rearrangement Identifier☆491Jul 1, 2026Updated 2 months ago
- Gene cluster comparison figure generator☆655Dec 22, 2025Updated 9 months ago
- python module to plot beautiful and highly customizable genome browser tracks☆902Sep 10, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tools for fast and flexible genome assembly scaffolding and improvement☆576Feb 14, 2024Updated 2 years ago
- Tool to plot synteny and structural rearrangements between genomes☆356Jul 27, 2026Updated last month
- Genome browser and variant annotation☆399Aug 24, 2026Updated last month
- An accurate GFF3/GTF lift over pipeline☆558Aug 1, 2023Updated 3 years ago
- A genome visualization python package for comparative genomics☆425Jun 14, 2026Updated 3 months ago
- fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing☆877May 2, 2026Updated 4 months ago
- the pangenome graph builder☆515Jul 24, 2026Updated last month
- Official home of genome aligner based upon notion of Cactus graphs☆707Updated this week
- Python library to facilitate genome assembly, annotation, and comparative genomics☆929Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆589Sep 7, 2026Updated 2 weeks ago
- Bioinformatics tool for Locus Visualisation☆171Mar 30, 2026Updated 5 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆116Updated this week
- ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2☆600Jul 5, 2026Updated 2 months ago
- ☆166Apr 13, 2026Updated 5 months ago
- Download FASTQ files from SRA or ENA repositories.☆405May 16, 2026Updated 4 months ago
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆264Sep 16, 2026Updated last week
- Tool for plotting sequencing data along genomic coordinates.☆350Dec 12, 2025Updated 9 months ago
- Inference of ploidy and heterozygosity structure using whole genome sequencing data☆302Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Jasmine: SV Merging Across Samples☆261Dec 20, 2024Updated last year
- Constructing a pangenome gene graph☆212Aug 11, 2025Updated last year
- A collection of tools for Hi-C data analysis☆653Sep 15, 2026Updated last week
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆110Dec 11, 2023Updated 2 years ago
- Align proteins to genomes with splicing and frameshift☆420Jan 5, 2026Updated 8 months ago
- A genome completeness evaluation tool based on miniprot☆267Aug 17, 2026Updated last month
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,595Updated this week
- Generate an interactive dot plot from mummer or minimap alignments☆220Jan 17, 2024Updated 2 years ago
- Fast alignment and preprocessing of chromatin profiles☆226Mar 20, 2026Updated 6 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- SRF: Satellite Repeat Finder☆109Jan 8, 2024Updated 2 years ago
- Identify and find telomeres, or telomeric repeats in a genome.☆177Nov 24, 2025Updated 10 months ago
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆814May 31, 2026Updated 3 months ago
- An R package designed for drawing gene arrow maps☆102Sep 29, 2025Updated 11 months ago
- Reorients assembled microbial sequences☆146Jun 30, 2026Updated 2 months ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆377Jul 6, 2026Updated 2 months ago
- base-accurate DNA sequence alignments using WFA and mashmap3☆224Aug 27, 2026Updated 3 weeks ago