A list of interesting genome browser and genome visualization programs
☆1,100Jul 21, 2026Updated 3 weeks ago
Alternatives and similar repositories for awesome-genome-visualization
Users that are interested in awesome-genome-visualization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A grammar of graphics for comparative genomics☆776Jul 3, 2026Updated last month
- Plot structural variant signals from many BAMs and CRAMs☆573Jul 13, 2024Updated 2 years ago
- Synteny and Rearrangement Identifier☆484Jul 1, 2026Updated last month
- python module to plot beautiful and highly customizable genome browser tracks☆897Jul 10, 2024Updated 2 years ago
- Gene cluster comparison figure generator☆653Dec 22, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tools for fast and flexible genome assembly scaffolding and improvement☆575Feb 14, 2024Updated 2 years ago
- Tool to plot synteny and structural rearrangements between genomes☆352Jul 27, 2026Updated 2 weeks ago
- Genome browser and variant annotation☆397Jun 25, 2026Updated last month
- An accurate GFF3/GTF lift over pipeline☆548Aug 1, 2023Updated 3 years ago
- A genome visualization python package for comparative genomics☆416Jun 14, 2026Updated 2 months ago
- fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing☆869May 2, 2026Updated 3 months ago
- the pangenome graph builder☆510Jul 24, 2026Updated 3 weeks ago
- Official home of genome aligner based upon notion of Cactus graphs☆700Updated this week
- Python library to facilitate genome assembly, annotation, and comparative genomics☆925Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆583May 18, 2026Updated 2 months ago
- Bioinformatics tool for Locus Visualisation☆171Mar 30, 2026Updated 4 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆114Jun 12, 2026Updated 2 months ago
- ➡️️➡️️⬅️️➡ ️️ Draw gene arrow maps in ggplot2☆598Jul 5, 2026Updated last month
- ☆164Apr 13, 2026Updated 4 months ago
- Download FASTQ files from SRA or ENA repositories.☆404May 16, 2026Updated 2 months ago
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆260Jul 10, 2026Updated last month
- Inference of ploidy and heterozygosity structure using whole genome sequencing data☆298May 28, 2026Updated 2 months ago
- Tool for plotting sequencing data along genomic coordinates.☆350Dec 12, 2025Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Jasmine: SV Merging Across Samples☆260Dec 20, 2024Updated last year
- Constructing a pangenome gene graph☆211Aug 11, 2025Updated last year
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆109Dec 11, 2023Updated 2 years ago
- A genome completeness evaluation tool based on miniprot☆260Updated this week
- Align proteins to genomes with splicing and frameshift☆415Jan 5, 2026Updated 7 months ago
- A collection of tools for Hi-C data analysis☆650Jul 18, 2026Updated 3 weeks ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,588Jul 8, 2026Updated last month
- Generate an interactive dot plot from mummer or minimap alignments☆219Jan 17, 2024Updated 2 years ago
- Fast alignment and preprocessing of chromatin profiles☆226Mar 20, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆800May 31, 2026Updated 2 months ago
- SRF: Satellite Repeat Finder☆107Jan 8, 2024Updated 2 years ago
- Identify and find telomeres, or telomeric repeats in a genome.☆174Nov 24, 2025Updated 8 months ago
- An R package designed for drawing gene arrow maps☆99Sep 29, 2025Updated 10 months ago
- Reorients assembled microbial sequences☆143Jun 30, 2026Updated last month
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆372Jul 6, 2026Updated last month
- base-accurate DNA sequence alignments using WFA and mashmap3☆222Updated this week