sanger-pathogens / circlatorLinks
A tool to circularize genome assemblies
☆243Updated last year
Alternatives and similar repositories for circlator
Users that are interested in circlator are comparing it to the libraries listed below
Sorting:
- Bacterial ribosomal RNA predictor☆247Updated last year
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆281Updated 8 months ago
- Fast genome analysis from unassembled short reads☆292Updated last year
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆202Updated 10 months ago
- Fast and accurately polish the genome generated by long reads.☆227Updated 6 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆325Updated last year
- Synteny and Rearrangement Identifier☆396Updated 2 months ago
- Pan-genome wide association studies☆197Updated last year
- Genome Assembly and Annotation Service code☆213Updated last year
- SortMeRNA: next-generation sequence filtering and alignment tool☆270Updated 6 months ago
- k-mer based assembly evaluation☆315Updated last year
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆230Updated 2 years ago
- An overview of all nanopack tools☆260Updated 2 years ago
- Quality control for MinION sequencing data☆217Updated 2 years ago
- NOVOPlasty - The organelle assembler and heteroplasmy caller☆189Updated last year
- Tool to plot synteny and structural rearrangements between genomes☆311Updated 3 months ago
- ☆256Updated 2 weeks ago
- Assembly and binning of metagenomes☆241Updated last week
- An updated pipeline for pangenome investigation☆306Updated 4 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆260Updated 7 months ago
- A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.☆205Updated 2 years ago
- Pilon is an automated genome assembly improvement and variant detection tool☆367Updated 3 years ago
- PASA software☆188Updated 5 months ago
- Classifier for metagenomic sequences☆261Updated 3 weeks ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆233Updated last year
- De-Novo Repeat Discovery Tool☆216Updated 2 weeks ago
- Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics☆191Updated 2 months ago
- haplotypic duplication identification tool☆249Updated last year
- Short Read Sequence Typing for Bacterial Pathogens☆135Updated 4 years ago
- BSR-Based Allele Calling Algorithm☆148Updated 3 weeks ago