Alternatives and similar repositories for PSAURON:

Users that are interested in PSAURON are comparing it to the libraries listed below

• Gaius-Augustus / Tiberius
  Tiberius is a deep learning gene finder.
  ☆46Updated this week
• micahvista / VACmap
  VACmap: a long-read aligner specifically designed for complex structural variation discovery
  ☆30Updated 2 months ago
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆27Updated 2 years ago
• agshumate / LiftoffTools
  ☆25Updated last year
• RolandFaure / Hairsplitter
  Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.
  ☆34Updated last month
• davidemms / STAG
  STAG: Species Tree from All Genes
  ☆33Updated 6 years ago
• at-cg / RAFT
  ☆21Updated 5 months ago
• PombertLab / SYNY
  The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.
  ☆40Updated 3 weeks ago
• CarineRey / pcoc
  Convergent substitution detection tool based on the PCOC model
  ☆30Updated 3 years ago
• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆36Updated this week
• bpucker / KIPEs
  Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…
  ☆14Updated 7 months ago
• Gabaldonlab / perSVade
  perSVade: personalized Structural Variation detection
  ☆38Updated 2 months ago
• daewoooo / SVbyEye
  ☆74Updated 3 months ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• Adamtaranto / teloclip
  A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
  ☆35Updated last month
• HaploKit / vechat
  Correcting errors in noisy long reads using variation graphs
  ☆51Updated 2 years ago
• formbio / FLAG
  ☆31Updated 6 months ago
• OLF-Bioinformatics / VariantDetective
  Identify short variants and structural variants from raw sequencing data or genomic sequences
  ☆22Updated 10 months ago
• shelkmike / Mabs
  Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
  ☆29Updated last month
• yanyew / SynGAP
  ☆31Updated 2 months ago
• DessimozLab / FastOMA
  FastOMA is a scalable software package to infer orthology relationship.
  ☆64Updated this week
• dietvin / pod5Viewer
  GUI for inspecting POD5 files
  ☆24Updated last month
• bcgsc / goldrush
  Linear-time de novo Long Read Assembler
  ☆37Updated this week
• nextgenusfs / redmask
  Genome assembly soft-masking using Red (REpeat Detector)
  ☆15Updated 6 years ago
• PacificBiosciences / jasmine
  Predict 5mC in PacBio HiFi reads
  ☆36Updated 2 weeks ago
• lh3 / calN50
  Compute N50/NG50 and auN/auNG
  ☆31Updated last year
• JLSteenwyk / orthofisher
  a broadly applicable tool for automated gene identification and retrieval
  ☆30Updated last month
• Kuanhao-Chao / LiftOn
  🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies
  ☆71Updated last month
• alekseyzimin / EviAnn_release
  This is the standalone version of the EviAnn pipeline
  ☆24Updated 2 weeks ago
• i10labtitech / GINGER
  ☆27Updated last year