moshi4 / CafePlotterLinks
A tool for plotting CAFE5 gene family expansion/contraction result
☆33Updated 2 years ago
Alternatives and similar repositories for CafePlotter
Users that are interested in CafePlotter are comparing it to the libraries listed below
Sorting:
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆88Updated last year
- ☆84Updated last week
- Neural network classification of TE☆96Updated 2 months ago
- An efficient assembly tool for plant mitochondrial genome☆65Updated last year
- Genome annotation pipeline☆64Updated last year
- Plastid Genome Annotator☆54Updated 5 years ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 6 years ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆74Updated last week
- ☆41Updated 2 years ago
- A parallel wrapper for LTR_FINDER☆55Updated 8 months ago
- ☆83Updated last year
- ☆45Updated 3 years ago
- scripts used in Rice Pangenome Projects (Evolution).☆13Updated 2 years ago
- NLR-Annotator upload☆74Updated 2 years ago
- DNA序列比对结果 可视化展示工具☆56Updated 2 years ago
- This is the standalone version of the EviAnn pipeline☆130Updated last week
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆84Updated 4 years ago
- A snakemake workflow for de novo genome assembly. It produces chromosome-scale primary/phased assemblies complete with organelles (mitoch…☆31Updated 6 months ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆35Updated this week
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 7 months ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated last year
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆100Updated 3 weeks ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- BAsh-Based Automated Parallel Positive selection Analysis☆16Updated 2 months ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Genome Annotation Pipeline☆42Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated last month