An open-source toolkit for large-scale genomic analysis
☆310Oct 22, 2026Updated last week
Alternatives and similar repositories for glow
Users that are interested in glow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆36May 6, 2026Updated 5 months ago
- Cloud-native genomic dataframes and batch computing☆1,082Updated this week
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆109Updated this week
- High performance data storage for importing, querying and transforming variants.☆99Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Scalable genetics toolkit☆285Updated this week
- machine learning for genomic variants☆147Jun 23, 2026Updated 4 months ago
- ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 li…☆1,060Mar 17, 2026Updated 7 months ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Mar 17, 2026Updated 7 months ago
- secondary analysis pipelines parallelized with apache spark☆18Mar 2, 2022Updated 4 years ago
- GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular …☆48Updated this week
- Spark VCF data source implementation for Dataframes☆15Jul 15, 2022Updated 4 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 5 years ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆190Apr 12, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Oct 21, 2019Updated 7 years ago
- ☆71Updated this week
- ☆14Updated this week
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- Rare variant test software for next generation sequencing data☆144Jan 26, 2022Updated 4 years ago
- This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.☆376Aug 17, 2026Updated 2 months ago
- A scalable genome browser. Apache 2 licensed.☆127Dec 2, 2022Updated 3 years ago
- Tools for working with genomic and high throughput sequencing data.☆380Updated this week
- Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale product…☆1,085Oct 14, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14May 20, 2016Updated 10 years ago
- The D4 Quantitative Data Format☆176Nov 28, 2025Updated 11 months ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆270Oct 2, 2026Updated last month
- Warp Analysis Research Pipelines☆232Updated this week
- cython + htslib == fast VCF and BCF processing☆451Sep 10, 2026Updated last month
- Python library & CLI to create, view and edit PFB files☆14Updated this week
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆70May 27, 2022Updated 4 years ago
- SEQSpark documentation☆18Nov 17, 2020Updated 5 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆73Aug 22, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PLINK reader for Python.☆90May 12, 2025Updated last year
- GCP Variant Transforms☆147May 21, 2026Updated 5 months ago
- ☆15Jan 16, 2018Updated 8 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 4 years ago
- The Genomics Tertiary Analysis and Machine Learning Using Amazon SageMaker solution creates a scalable environment in AWS to develop mach…☆11Jul 7, 2023Updated 3 years ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆60Oct 29, 2023Updated 3 years ago