projectglow / glow
An open-source toolkit for large-scale genomic analysis
☆272Updated this week
Related projects ⓘ
Alternatives and complementary repositories for glow
- machine learning for genomic variants☆140Updated last month
- A scalable genome browser. Apache 2 licensed.☆125Updated last year
- GenomicsDB☆111Updated last year
- An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company …☆166Updated this week
- High performance data storage for importing, querying and transforming variants.☆95Updated this week
- ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 li…☆1,003Updated last month
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆69Updated last year
- Cloud-native genomic dataframes and batch computing☆984Updated this week
- A curated collection of Nextflow implementation patterns☆334Updated last year
- A Java API for high-throughput sequencing data (HTS) formats.☆285Updated this week
- A Python package for exploring and analysing genetic variation data☆288Updated 3 weeks ago
- Tools for working with genomic and high throughput sequencing data.☆315Updated 3 weeks ago
- Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…☆295Updated 6 years ago
- Educational materials for learning WDL☆122Updated 8 months ago
- Scalable genetics toolkit☆235Updated 2 weeks ago
- GCP Variant Transforms☆137Updated 2 years ago
- A curated list of nextflow based pipelines☆572Updated 2 years ago
- Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale product…☆998Updated this week
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆96Updated 6 years ago
- WDL Analysis Research Pipelines☆202Updated this week
- Nextflow Tower system☆147Updated last year
- DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) …☆230Updated last month
- GCP for Bioinformatics Researchers☆235Updated last week
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆39Updated last week
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆241Updated 4 years ago
- Source code and related materials for the O'Reilly book☆93Updated 2 years ago
- Bioinformatics for the Scala programming language☆109Updated 9 months ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆89Updated 2 weeks ago
- web-based analysis tool for rare disease genomics☆176Updated this week
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 5 years ago