Extends miniwdl to run workflows on AWS Batch & EFS
☆22Feb 5, 2024Updated 2 years ago
Alternatives and similar repositories for miniwdl-aws
Users that are interested in miniwdl-aws are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WDL plugin for pytest☆48Aug 1, 2023Updated 2 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 3 months ago
- Python library & CLI to create, view and edit PFB files☆12Feb 19, 2026Updated last month
- A python tool for parsing pedigree files☆16Aug 29, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- Free mtDNA Haplogroup Classification Service☆32Jul 3, 2025Updated 8 months ago
- A collection of reusable WDL tasks. Category:Other☆88Mar 10, 2026Updated 2 weeks ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆12Mar 16, 2026Updated 2 weeks ago
- Anno is a variant annotation tool☆24May 18, 2016Updated 9 years ago
- NEAT read simulation tools☆101Jun 22, 2022Updated 3 years ago
- Workflow Description Language developer tools & local runner☆200Feb 8, 2026Updated last month
- VariantStore: A Large-Scale Genomic Variant Search Index☆39Jul 9, 2021Updated 4 years ago
- Genomics Workflows on AWS☆146Jul 31, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A {crew} launcher plugin for AWS Batch☆18Jan 5, 2026Updated 2 months ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- Variant Graph Craft (VGC) is an interactive genomic variant visualization program.☆17May 17, 2024Updated last year
- miRTrace☆11Jun 14, 2023Updated 2 years ago
- Portable WDL workflows for IDseq production pipelines☆32Jan 19, 2022Updated 4 years ago
- small RNA analysis programs: standalone jar files (sRNAbench, sRNAde, etc), manuals and Docker image☆16Jan 16, 2023Updated 3 years ago
- A method of assessing sequence complexity based on kmer frequencies☆33Apr 9, 2018Updated 7 years ago
- mutation testing for R☆16Nov 11, 2024Updated last year
- The advanced implementation for BioChatter, using Next.js☆17Jan 17, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 2 months ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆24Jun 30, 2025Updated 9 months ago
- VariantGrid public repo☆24Updated this week
- Nextflow Tower CLI tool☆53Updated this week
- CloudFlare Dynamic DNS Client☆17Jun 29, 2024Updated last year
- Rough and dirty web Mud game - using SockJS and Django☆21Nov 3, 2011Updated 14 years ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- R Bindings for prqlc☆58Feb 5, 2026Updated last month
- Run Python functions locally or in the cloud. Built for computational science.☆23Oct 4, 2023Updated 2 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Dec 25, 2023Updated 2 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Aug 9, 2016Updated 9 years ago
- ☆14Dec 18, 2023Updated 2 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Jun 25, 2019Updated 6 years ago