Microsoft Genomics implementation of the Broad Institute's Cromwell workflow engine on Azure
☆141May 16, 2025Updated 10 months ago
Alternatives and similar repositories for CromwellOnAzure
Users that are interested in CromwellOnAzure are comparing it to the libraries listed below
Sorting:
- C# implementation of the GA4GH TES API; provides distributed batch task execution on Microsoft Azure☆37May 16, 2025Updated 10 months ago
- Jupyter Notebooks on Azure for Genomics Data Analysis☆110May 9, 2025Updated 10 months ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- ☆12Sep 27, 2023Updated 2 years ago
- ☆32Jan 9, 2026Updated 2 months ago
- Workflow Description Language developer tools & local runner☆200Feb 8, 2026Updated last month
- A migration sample to help moving content from Power BI Workspace Collections to Power BI Service Embedded.☆16Sep 14, 2018Updated 7 years ago
- ☆93Feb 25, 2026Updated 3 weeks ago
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 2 months ago
- Warp Analysis Research Pipelines☆225Updated this week
- Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse☆20Oct 18, 2022Updated 3 years ago
- Rich IDE support for Workflow Description Language☆43Mar 28, 2025Updated 11 months ago
- Lossless VCF compression☆21Mar 4, 2022Updated 4 years ago
- Image comparison tests for PowerBI CV☆14Jun 2, 2023Updated 2 years ago
- ☆17Jul 30, 2025Updated 7 months ago
- A collection of reusable WDL tasks. Category:Other☆88Mar 10, 2026Updated last week
- GCP Variant Transforms☆143Jun 30, 2025Updated 8 months ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale product…☆1,055Updated this week
- A 3D visual using WebGL for plotting locations, with category values displayed as bar heights and heat maps. Shift+Click on bar to change…☆22Apr 16, 2025Updated 11 months ago
- Notebook service☆44Mar 11, 2026Updated last week
- Output FASTQ summary statistics in JSON format☆29Oct 30, 2022Updated 3 years ago
- Training material for the GWAS Catalog REST API workshop☆13May 22, 2023Updated 2 years ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆23Nov 16, 2022Updated 3 years ago
- Deep Learning based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/☆48Aug 20, 2025Updated 7 months ago
- Cromwell output organizer☆13May 18, 2021Updated 4 years ago
- Pipelines for processing malaria parasite and mosquito genome sequence data.☆15Nov 2, 2024Updated last year
- [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute☆18Sep 29, 2023Updated 2 years ago
- ☆11Feb 14, 2023Updated 3 years ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆59Oct 29, 2023Updated 2 years ago
- A crate for working with genomics chain files.☆12Aug 6, 2025Updated 7 months ago
- ☆10Mar 5, 2026Updated 2 weeks ago
- Type utility interfaces for creating powerbi custom visuals☆14Apr 3, 2024Updated last year
- A series of tools and pipelines for genotyping MHC / HLA genes and alleles using SMRT Sequencing☆22Aug 29, 2016Updated 9 years ago
- WDL plugin for pytest☆48Aug 1, 2023Updated 2 years ago
- Allele frequency filter app☆14May 4, 2022Updated 3 years ago
- Run CellProfiler on Terra. Contains workflows that enable a full end-to-end Cell Painting pipeline.☆11May 22, 2024Updated last year
- WDL tools for parsing, type-checking, and more☆28Sep 2, 2025Updated 6 months ago
- ☆11Dec 8, 2022Updated 3 years ago