Alternatives and similar repositories for CromwellOnAzure

Users that are interested in CromwellOnAzure are comparing it to the libraries listed below

• microsoft / genomicsnotebook
  Jupyter Notebooks on Azure for Genomics Data Analysis
  ☆110Updated 2 months ago
• microsoft / tes-azure-legacy
  [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute
  ☆18Updated last year
• broadinstitute / genomics-in-the-cloud
  Source code and related materials for the O'Reilly book
  ☆96Updated 2 years ago
• opencb / opencga
  An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company …
  ☆171Updated this week
• lynnlangit / TeamTeri
  Bioinformatics on GCP, AWS or Azure
  ☆57Updated last month
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆151Updated 5 months ago
• lynnlangit / gcp-for-bioinformatics
  GCP for Bioinformatics Researchers
  ☆267Updated last month
• GenomicsDB / GenomicsDB
  High performance data storage for importing, querying and transforming variants.
  ☆98Updated 2 months ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆90Updated 3 months ago
• Azure / azure-hpc
  Microsoft Azure HPC & Big Compute
  ☆14Updated 5 years ago
• aehrc / VariantSpark
  machine learning for genomic variants
  ☆145Updated 9 months ago
• nf-core / raredisease
  Call and score variants from WGS/WES of rare disease patients.
  ☆104Updated last week
• broadinstitute / seqr
  web-based analysis tool for rare disease genomics
  ☆189Updated this week
• bioconda / bioconda-utils
  Utilities for building and managing bioconda recipes
  ☆102Updated last week
• gatk-workflows / gatk4-data-processing
  Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools
  ☆155Updated 2 years ago
• microsoft / ga4gh-tes
  C# implementation of the GA4GH TES API; provides distributed batch task execution on Microsoft Azure
  ☆37Updated 2 months ago
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆98Updated 7 years ago
• microsoft / nextflow-runner
  ☆15Updated 2 years ago
• gatk-workflows / gatk4-germline-snps-indels
  Workflows for germline short variant discovery with GATK4
  ☆138Updated 4 years ago
• broadinstitute / long-read-pipelines
  Long read production pipelines
  ☆145Updated 2 weeks ago
• PapenfussLab / gridss
  GRIDSS: the Genomic Rearrangement IDentification Software Suite
  ☆269Updated last month
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆57Updated last week
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆87Updated last week
• broadinstitute / warp
  WDL Analysis Research Pipelines
  ☆213Updated this week
• pcingola / SnpEff
  ☆279Updated 5 months ago
• ncbi / ngs-tools
  ☆107Updated 3 weeks ago
• bioinform / somaticseq
  An ensemble approach to accurately detect somatic mutations using SomaticSeq
  ☆196Updated last week
• bcgsc / abyss
  Assemble large genomes using short reads
  ☆321Updated 3 months ago