bigdatagenomics / mangoLinks
A scalable genome browser. Apache 2 licensed.
☆125Updated 2 years ago
Alternatives and similar repositories for mango
Users that are interested in mango are comparing it to the libraries listed below
Sorting:
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆71Updated 2 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- GenomicsDB☆111Updated 2 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆218Updated 2 years ago
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆69Updated 5 years ago
- machine learning for genomic variants☆146Updated 9 months ago
- An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company …☆172Updated this week
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 5 months ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 8 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 5 months ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Updated 8 years ago
- MyVariant.info: A BioThings API for human variant annotations☆95Updated last week
- Quality control methods for human genomic variants.☆62Updated 2 years ago
- High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a ne…☆92Updated this week
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- a lightweight db framework for exploring genetic variation.☆323Updated 5 years ago
- Library for manipulating genomic variants and predicting their effects☆84Updated last year
- Fast spliced aligner with low memory requirements☆41Updated 9 years ago
- Documentation for the Google Genomics cookbook.☆141Updated 5 years ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆127Updated 5 years ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- New url: https://github.com/biointec/halvade☆19Updated 8 years ago
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆143Updated 6 years ago
- VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information☆33Updated 7 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.☆54Updated 6 years ago
- Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…☆294Updated 6 years ago
- The Genome Modeling System installer☆79Updated 10 years ago