broadinstitute / wdl-runnerLinks
Easily run WDL workflows on GCP
☆14Updated 4 years ago
Alternatives and similar repositories for wdl-runner
Users that are interested in wdl-runner are comparing it to the libraries listed below
Sorting:
- Library for indexing VCF files for random access searches by rsID☆17Updated 5 months ago
- Allele frequency filter app☆14Updated 3 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- Interactive eQTL visualizations☆13Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- ☆21Updated 4 years ago
- ☆11Updated 2 years ago
- Bedfile perturbation tool☆17Updated 3 months ago
- Finding cryptic relationships to boost disease gene detection☆12Updated 2 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- Creates a target specific exome_full192.coverage.txt file required by MutSig☆21Updated 4 years ago
- Clonal reconstruction from HTS data☆10Updated 4 years ago
- Building the constrained coding regions (CCR) model☆16Updated 7 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Updated 7 years ago
- Interactive demonstration of how to use PCA, t-SNE, and UMAP on genotype data from the Thousand Genome Project.☆20Updated 5 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 5 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 6 months ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- Keep Me Around: Intron Retention Detection☆30Updated 6 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated last month
- fast webservices based query tool for large sets of genomic features☆25Updated 8 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Updated 3 weeks ago
- RNA-seq data comprehensive data analysis toolbox☆21Updated 3 years ago