verilylifesciences / variant-qc
Quality control methods for human genomic variants.
☆62Updated 2 years ago
Alternatives and similar repositories for variant-qc:
Users that are interested in variant-qc are comparing it to the libraries listed below
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 8 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆26Updated 5 years ago
- Python graph database framework for bioinformatics☆93Updated 3 years ago
- Benchmarking toolkit for variant calling☆47Updated 4 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆40Updated 3 weeks ago
- Translation layer between the GDC Data Dictionary and psqlgraph☆28Updated last year
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated last year
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆35Updated 2 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.☆54Updated 5 years ago
- Library for manipulating genomic variants and predicting their effects☆84Updated 8 months ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆69Updated 2 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- Examples for the Google Genomics Pipelines API.☆50Updated 7 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆65Updated 4 years ago
- NGS course☆33Updated 8 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated 2 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- In-progress projects at Harvard School of Public Health Bioinformatics Core☆41Updated 6 years ago
- Fast spliced aligner with low memory requirements☆41Updated 9 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated last month
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- conda recipes for genomic data☆85Updated 3 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆218Updated 2 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Documentation for the Google Genomics cookbook.☆142Updated 4 years ago
- BioThings API framework - Making high-performance API for biological annotation data☆46Updated this week