☆31Jun 12, 2020Updated 5 years ago
Alternatives and similar repositories for CMScaller
Users that are interested in CMScaller are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Network construction Algorithm☆22Sep 5, 2024Updated last year
- ☆13Jun 7, 2024Updated last year
- R implementation of the BAGEL method to call for gene essentiality significance☆11May 1, 2018Updated 7 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆47Oct 13, 2025Updated 5 months ago
- An R package to calculate Dynamical Network Biomarkers (DNB).☆10Sep 16, 2022Updated 3 years ago
- Code to reproduce TNBC analysis and figures☆24Jun 13, 2022Updated 3 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆26May 12, 2020Updated 5 years ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- Scripts used for the ACT paper☆12May 6, 2021Updated 4 years ago
- R package with netDx software and data for examples☆13Feb 22, 2023Updated 3 years ago
- This is the development fork - Stable code has been moved to ==>☆27Nov 20, 2019Updated 6 years ago
- ☆17Sep 16, 2024Updated last year
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 8 years ago
- stageR package☆13Feb 28, 2023Updated 3 years ago
- Marker gene selection from scRNA-seq data☆16Sep 15, 2020Updated 5 years ago
- Chromatin domains bursting with flavor☆12Dec 29, 2019Updated 6 years ago
- Bostongene cell deconvolution algorithm from RNAseq☆60Jan 15, 2024Updated 2 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping☆10Jun 6, 2020Updated 5 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆14Jul 23, 2020Updated 5 years ago
- Pipeline for SpatialTranscriptomics and 10X Visium data☆21Jul 22, 2025Updated 8 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆17Aug 12, 2022Updated 3 years ago
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆27Nov 2, 2021Updated 4 years ago
- ☆18Jun 13, 2019Updated 6 years ago
- ☆14Mar 7, 2024Updated 2 years ago
- SCDC☆46Jun 20, 2025Updated 9 months ago
- ☆27May 8, 2021Updated 4 years ago
- ☆49Jun 24, 2022Updated 3 years ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆24Dec 3, 2025Updated 3 months ago
- ☆65Aug 2, 2019Updated 6 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆40Sep 5, 2021Updated 4 years ago
- Cellular Genetics Informatics Notebooks☆24Nov 7, 2025Updated 4 months ago
- A General Framework for Consensus Partitioning☆64Jan 30, 2026Updated last month
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Oct 28, 2022Updated 3 years ago
- ☆27Mar 18, 2022Updated 4 years ago
- ☆17Dec 9, 2019Updated 6 years ago
- ☆64Sep 15, 2020Updated 5 years ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆25Jul 31, 2023Updated 2 years ago