gpli / DNBLinks
An R package to calculate Dynamical Network Biomarkers (DNB).
☆9Updated 2 years ago
Alternatives and similar repositories for DNB
Users that are interested in DNB are comparing it to the libraries listed below
Sorting:
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 2 months ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 8 months ago
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- ☆18Updated 5 years ago
- An R package for visualising cell-cell interactions☆44Updated 11 months ago
- Pseudotime Analysis for Bulk Data☆16Updated last year
- scAB detects multiresolution cell states with clinical significance☆17Updated 2 years ago
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆15Updated 2 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated 10 months ago
- ☆22Updated 2 years ago
- ☆13Updated 7 years ago
- Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit☆11Updated this week
- Hierarchical Cell Annotation☆23Updated 8 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆16Updated 4 years ago
- BulkSignalR☆22Updated 2 weeks ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- ☆58Updated last year
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆12Updated 4 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆14Updated last year
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- Functional Annotation for Single-Cell Transcriptomics☆10Updated last year
- This repository contained single-cell RNA-seq datasets with ICB treated patients☆11Updated 9 months ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆29Updated 2 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- ☆14Updated last year
- ☆33Updated 3 years ago