gpli / DNBLinks
An R package to calculate Dynamical Network Biomarkers (DNB).
β10Updated 3 years ago
Alternatives and similar repositories for DNB
Users that are interested in DNB are comparing it to the libraries listed below
Sorting:
- π― tigeR: Tumor Immunotherapy Gene Expression Data Analysis R packageβ54Updated 2 weeks ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkersβ21Updated 3 years ago
- Calculating Tumor microenvironment scoreβ29Updated 3 years ago
- An R package for visualising cell-cell interactionsβ46Updated last year
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.β10Updated last year
- Code to reproduce TNBC analysis and figuresβ24Updated 3 years ago
- β22Updated 2 years ago
- β13Updated 8 years ago
- The source code of web server TIP, including example data.β20Updated 6 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancerβ16Updated last year
- R package for Bioconductor submissionβ38Updated 3 years ago
- Hierarchical Cell Annotationβ26Updated last year
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includiβ¦β15Updated 8 months ago
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptβ¦β11Updated 2 years ago
- A database of useful gene signatures for single-cell analysisβ28Updated 8 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020β33Updated 4 years ago
- β31Updated 5 years ago
- β14Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.β34Updated 5 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Toolsβ39Updated this week
- Deconvolution of spatial transcriptomics at single-cell resolutionβ20Updated last year
- Human brain, >200,000 nucleiβ23Updated 4 years ago
- BulkSignalRβ26Updated 6 months ago
- Functional Annotation for Single-Cell Transcriptomicsβ11Updated last year
- Functions to analyze copy number aberrations in single-cell dataβ13Updated last year
- β19Updated 3 years ago
- β48Updated last year
- β32Updated 4 years ago
- Single-cell analysis with non-negative matrix factorizationβ47Updated 6 months ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/β13Updated 4 years ago