☆30Jul 8, 2018Updated 7 years ago
Alternatives and similar repositories for dysfunction_interaction_test
Users that are interested in dysfunction_interaction_test are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- ☆41Apr 16, 2018Updated 8 years ago
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆24Oct 31, 2017Updated 8 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 3 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆74Jul 26, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Jan 9, 2023Updated 3 years ago
- R scripts used for MYC analyses☆10Jan 30, 2018Updated 8 years ago
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆114Feb 6, 2026Updated 2 months ago
- ☆13Apr 22, 2021Updated 5 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- ☆10Dec 4, 2019Updated 6 years ago
- Miscellaneous functions commonly used by 'YuLab-SMU'.☆38Mar 25, 2026Updated last month
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 4 months ago
- An R Interface to the ImmuneSpace database portal☆24Nov 28, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This repository contained single-cell RNA-seq datasets with ICB treated patients☆16Nov 8, 2024Updated last year
- Cell types enrichment analysis☆210May 27, 2024Updated last year
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Aug 30, 2019Updated 6 years ago
- PCaDB - a comprehensive and interactive database for transcriptomes from prostate cancer population cohorts☆10Dec 29, 2021Updated 4 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆147Jul 19, 2021Updated 4 years ago
- Tools for manipulating annotated data matrices☆93Oct 13, 2021Updated 4 years ago
- CellNet, for cancer☆10Jul 14, 2022Updated 3 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆76Feb 27, 2023Updated 3 years ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆135Sep 6, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Scissor package☆261May 10, 2024Updated last year
- GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted …☆10Nov 18, 2023Updated 2 years ago
- ☆50Jan 16, 2020Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Feb 12, 2021Updated 5 years ago
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequenc…☆32May 20, 2025Updated 11 months ago
- ☆10Aug 22, 2018Updated 7 years ago
- A package for downloading and uploading figshare data☆27May 22, 2023Updated 2 years ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆32Jan 28, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated 3 months ago
- 是基础也是综合(一系列对象及函数，需要细致的讲解)☆30Apr 9, 2016Updated 10 years ago
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.…☆288Updated this week
- A shell to facilitate loading / running CIBERSORT software in structured environments☆26May 9, 2018Updated 7 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆85Jul 12, 2023Updated 2 years ago
- This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…☆14Mar 10, 2019Updated 7 years ago
- scAB detects multiresolution cell states with clinical significance☆22Nov 14, 2022Updated 3 years ago