DavisLaboratory / singscoreLinks
An R/Bioconductor package that implements a single-sample molecular phenotyping approach
☆44Updated 8 months ago
Alternatives and similar repositories for singscore
Users that are interested in singscore are comparing it to the libraries listed below
Sorting:
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- ☆55Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- An r package that works as a wrapper to homologene☆46Updated last year
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- Normalize CITEseq Data☆66Updated 4 months ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- ☆41Updated 4 years ago
- An R-based interface for loom files☆66Updated 5 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- A General Framework for Consensus Partitioning☆63Updated 6 months ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- Toolkit for Single-Cell Velocity☆58Updated 3 weeks ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- ☆40Updated 7 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- ☆55Updated 5 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 7 months ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- ☆30Updated 7 years ago