juliendelile / MouseSpinalCordAtlas
Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing mouse spinal cord" (2019)
☆23Updated 5 years ago
Alternatives and similar repositories for MouseSpinalCordAtlas
Users that are interested in MouseSpinalCordAtlas are comparing it to the libraries listed below
Sorting:
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 2 years ago
- R package for single-cell RNA-sequencing analysis☆15Updated 3 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆24Updated 2 years ago
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆31Updated last year
- Build predicted cell-cell interaction networks from single-cell data.☆9Updated 2 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Updated 2 years ago
- analysis script for GBM single cell RNA seq data☆18Updated 3 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 3 years ago
- ☆13Updated 10 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 6 months ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- ☆13Updated 7 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 10 months ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆19Updated last year
- scRNAseq clustering tool☆11Updated 5 years ago
- R markdown notebooks for the Tabula Muris network analysis in Iacono et al. (2019)☆12Updated 3 years ago
- Supplementary software for "Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity"☆10Updated 7 years ago
- Analysis of single cell RNA-seq data from innate lympoid cells☆15Updated 7 years ago
- ☆41Updated 4 years ago