sjdlabgroup / CensusLinks
Accurate, deep, fast, and fully-automated scRNA-seq cell-type annotation
☆14Updated 10 months ago
Alternatives and similar repositories for Census
Users that are interested in Census are comparing it to the libraries listed below
Sorting:
- A pipeline for scRNA-seq data analysis☆15Updated 7 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆44Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 7 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆14Updated last year
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆65Updated 4 years ago
- A R package for advanced single cell data viz☆68Updated 2 months ago
- ☆18Updated last year
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Updated 4 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated last week
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- ☆32Updated 9 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Inferring CNV data from single cell ATAC seq☆25Updated 4 months ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 4 months ago
- SCDC☆45Updated 5 months ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆52Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- ☆50Updated 5 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆77Updated 3 months ago
- Methods for decontamination of single cell data☆50Updated 9 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆60Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year