lusystemsbio / NetActLinks
Network construction Algorithm
☆22Updated last year
Alternatives and similar repositories for NetAct
Users that are interested in NetAct are comparing it to the libraries listed below
Sorting:
- ☆40Updated 5 months ago
- ☆53Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- scWGCNA☆61Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆33Updated last year
- ☆48Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆33Updated 2 months ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆25Updated last week
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- An R package to plot maps of clone distributions in somatic evolution☆19Updated 2 years ago
- ☆39Updated 4 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 5 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- ☆47Updated 5 years ago
- Code to run the scHLApers pipeline for personalized single-cell HLA quantification☆17Updated 2 years ago
- R package of CSOmap(developing☆13Updated 3 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆20Updated 3 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆48Updated 2 years ago
- ☆25Updated 3 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Updated 4 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆46Updated 2 years ago