winstonbecker / scCRC_continuum
☆35Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for scCRC_continuum
- Code repository for single cell RNA-seq☆32Updated 4 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆91Updated 11 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆46Updated last year
- Single cell RNA-seq analysis bundle☆33Updated 5 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆72Updated 4 years ago
- Mollecular Functional Portraits☆36Updated 7 months ago
- Senescent Cell Identification☆29Updated 8 months ago
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆34Updated last year
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆28Updated 4 years ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆62Updated last month
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆77Updated last year
- ☆59Updated last year
- ☆95Updated last year
- Publication Page for Satpathy*, Granja* et al 2019☆92Updated 4 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆37Updated 3 years ago
- ☆57Updated 5 years ago
- ☆23Updated 9 months ago
- ☆42Updated 2 years ago
- ☆26Updated last year
- ☆41Updated 3 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆53Updated 3 years ago
- A R package for advanced single cell data viz☆58Updated last year
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆40Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆33Updated 9 months ago
- ☆30Updated 2 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆92Updated 5 months ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆75Updated 2 weeks ago
- ☆28Updated 2 years ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆47Updated 6 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆65Updated 4 years ago