jlaffy / scalopLinks
Single Cell Analysis Operations
☆13Updated 3 months ago
Alternatives and similar repositories for scalop
Users that are interested in scalop are comparing it to the libraries listed below
Sorting:
- Construct Tumor Transition Zone Microenvironment☆44Updated 7 months ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆53Updated last month
- ☆15Updated 2 years ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- ☆30Updated 2 years ago
- ☆20Updated last year
- ☆27Updated last year
- ☆31Updated last year
- ☆28Updated 4 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆66Updated 8 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- ☆16Updated 7 months ago
- ☆30Updated 4 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆71Updated 2 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆18Updated 11 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 4 months ago
- ☆13Updated last year
- ☆12Updated 3 months ago
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆56Updated 2 years ago
- ☆50Updated last year
- ☆43Updated 10 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated 11 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆41Updated 2 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 3 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year