lijxug / CSOmapR
R package of CSOmap(developing
☆14Updated 3 years ago
Alternatives and similar repositories for CSOmapR:
Users that are interested in CSOmapR are comparing it to the libraries listed below
- ☆47Updated 8 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- ☆33Updated 11 months ago
- ☆30Updated 2 months ago
- ☆16Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 5 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- A pipeline for scRNA-seq data analysis☆13Updated 2 weeks ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- single-cell clustering based on alternative splicing landscapes☆20Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 4 months ago
- ☆27Updated 3 years ago
- ☆17Updated 10 months ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆12Updated 9 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆19Updated 9 months ago
- ☆18Updated last year
- ☆24Updated 5 months ago
- meta-analysis of new and published human WAT single cell data☆12Updated last month
- ☆32Updated 5 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- ☆13Updated 7 years ago
- ☆20Updated last year
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago