tgen / banovichlabLinks
Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
☆47Updated last year
Alternatives and similar repositories for banovichlab
Users that are interested in banovichlab are comparing it to the libraries listed below
Sorting:
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 6 months ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39Updated 5 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago
- ☆47Updated 10 months ago
- ☆47Updated 5 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 4 months ago
- ☆50Updated 5 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- A pipeline for scRNA-seq data analysis☆15Updated 7 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- SCDC☆45Updated 4 months ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆41Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- ☆63Updated 5 years ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆90Updated 5 months ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆62Updated 6 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- A R package for advanced single cell data viz☆68Updated 2 months ago