BaderLab / netDx
R package with netDx software and data for examples
☆12Updated 2 years ago
Alternatives and similar repositories for netDx:
Users that are interested in netDx are comparing it to the libraries listed below
- ☆16Updated 5 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- PRS-on-SPARK☆18Updated 4 years ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆45Updated 5 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 months ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- ☆24Updated 4 years ago
- ☆12Updated 8 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆24Updated 8 months ago
- geneSurv: an interactive web-based tool for survival analysis in genomics research☆17Updated 5 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated 11 months ago
- Python client for MyVariant.info web services.☆23Updated 3 months ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆29Updated last year
- ☆14Updated 5 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆9Updated 2 years ago
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆22Updated 7 years ago
- An outcome weighted supervised clustering algorithm, designed to classify patients according to their molecular as well as time-event or …☆16Updated last year
- Full annotation using shape-constrained trees☆25Updated last year
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago
- Code for EpiMap data browser☆14Updated 11 months ago
- ☆23Updated 5 years ago
- Examples on using EpiGraphDB☆27Updated 4 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 5 years ago
- Examples using R and 1000 genomes data☆28Updated 3 years ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆44Updated 7 years ago