Allen Brain Atlas utilities, parsers and data structures
☆11Jun 25, 2017Updated 8 years ago
Alternatives and similar repositories for brainmap
Users that are interested in brainmap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.☆14Sep 3, 2016Updated 9 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆24Jun 28, 2018Updated 7 years ago
- Clone of the Bioconductor repository for the MouseGastrulationData package.☆13Jan 24, 2024Updated 2 years ago
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 5 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆26May 12, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 4 years ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated 2 years ago
- Attacking indiscriminately every header, cookie, GET and POST parameter with blind fury.☆13Sep 25, 2025Updated 6 months ago
- Building Gene Sets and Mapping mFISH Data☆16Aug 20, 2025Updated 7 months ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Sep 25, 2025Updated 6 months ago
- This project implenments the OSPF using Dijkstra algorithm (Open Shortest Path First) network protocol in python. Link-State Routing pr…☆12Sep 1, 2017Updated 8 years ago
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆40Mar 31, 2026Updated last week
- ☆12May 6, 2024Updated last year
- ☆11Dec 3, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 4 years ago
- An r package that works as a wrapper to homologene☆49Nov 2, 2023Updated 2 years ago
- AllenDigger, a tool for spatial expression data visualization, spatial heterogeneity delineation and single cell registration based on Al…☆14Apr 2, 2023Updated 3 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Toolbox for the processing and analysis of MALDI-MSI data☆15Sep 10, 2025Updated 7 months ago
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 2 months ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 2 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Apr 24, 2021Updated 4 years ago
- (Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.☆12Jun 28, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- MERFISH decoding software☆26Aug 16, 2025Updated 7 months ago
- scRNA-seq data visualization from scrattch☆29Aug 20, 2025Updated 7 months ago
- A fast, precise, pure Python implementation of Fisher's exact test☆12Mar 27, 2017Updated 9 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- A Python module for accessing Hamamatsu DCIMG files☆14Jun 28, 2023Updated 2 years ago
- Library for KEGG pathway enrichment analysis☆19Apr 1, 2026Updated last week
- A system for building mouse brain atlas from histology series☆11Aug 15, 2020Updated 5 years ago
- Compact hyperdrive for up to 16 independently movable electrodes☆18Aug 25, 2019Updated 6 years ago
- Configuration files repo☆13Jun 6, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Deep Learning Part 2, 2019 edition - transcriptions, screenshots and notebooks☆11Jul 19, 2019Updated 6 years ago
- ☆31Jun 12, 2020Updated 5 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format☆38Jan 10, 2025Updated last year
- Yet another list of ML resources☆25Mar 27, 2025Updated last year
- [source] CELLO - Cancer EvoLution toolbox for LOngitudinal data☆17Aug 24, 2020Updated 5 years ago
- Allen Institute mouse eye tracker.☆13Sep 7, 2018Updated 7 years ago