kordastilab / ImmunoClusterLinks
☆27Updated 4 years ago
Alternatives and similar repositories for ImmunoCluster
Users that are interested in ImmunoCluster are comparing it to the libraries listed below
Sorting:
- scDataviz: single cell dataviz and downstream analyses☆63Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 2 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 10 months ago
- Toolbox with R scripts☆38Updated 7 years ago
- Toolkit for Single-Cell Velocity☆59Updated 3 months ago
- Identify and correct invalid gene symbols☆59Updated 11 months ago
- An r package that works as a wrapper to homologene☆46Updated last year
- Cell type pipes for R☆52Updated last year
- Normalize CITEseq Data☆66Updated 6 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated last week
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆42Updated 3 years ago
- ☆55Updated 4 years ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in R☆111Updated last month
- An R interface to enrichR☆93Updated 8 months ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆54Updated 2 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆23Updated 3 months ago
- R package to visualize scRNA sequencing data.☆20Updated 3 years ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated 2 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆58Updated 2 years ago
- ☆16Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆124Updated 6 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month