plot Multiple Sequence Alignment(MSA) of Clustal by python package
☆15Mar 14, 2023Updated 3 years ago
Alternatives and similar repositories for pymsaploter
Users that are interested in pymsaploter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Jul 12, 2020Updated 6 years ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- ☆17Mar 2, 2024Updated 2 years ago
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆18Sep 16, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Tidyverse-based workflow for local synteny visualization☆19Sep 3, 2025Updated last year
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 3 years ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences☆19Updated this week
- plane sweep filtering genome alignments☆24Updated this week
- CViTjs - Chromosome Viewing Tool. A javascript tool for quick whole-genome views of data.☆12Jan 15, 2021Updated 5 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 5 years ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 10 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Sep 11, 2025Updated last year
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago
- Telomere compliment tools☆27Nov 17, 2025Updated 10 months ago
- A rapid and low-memory multiple-genome aligner for closely related genomes☆25Sep 3, 2025Updated last year
- MPU6050 interface for fpga☆11May 9, 2020Updated 6 years ago
- ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs☆37Oct 24, 2025Updated 11 months ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆50May 8, 2026Updated 4 months ago
- Javascript alignment viewer☆12Nov 29, 2023Updated 2 years ago
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Aug 4, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- Scanning and visualization for variable gap motifs.☆19Aug 6, 2024Updated 2 years ago
- Better Alignments with Translated HMMER☆27Updated this week
- blastn2dotplots: multiple dot-plot visualizer☆29Sep 15, 2025Updated last year
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated 2 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- Pooled Sequencing Analysis for Sex Signal☆15Sep 14, 2021Updated 5 years ago
- ☆18Jan 29, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- meta-pipeline for repetitive element de-fragmentation and annotation☆29Oct 1, 2020Updated 5 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Apr 28, 2023Updated 3 years ago
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated 4 months ago
- ☆12Feb 16, 2025Updated last year
- GFF toolkit☆17May 23, 2026Updated 4 months ago
- ☆23Dec 9, 2025Updated 9 months ago
- Variant Calling for the HPRC2☆17May 26, 2026Updated 3 months ago