ChenHuaLab / CEGA
Inferring natural selection by comparative population genomic analysis across species
☆23Updated last year
Alternatives and similar repositories for CEGA:
Users that are interested in CEGA are comparing it to the libraries listed below
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- ☆22Updated last year
- ☆27Updated 3 years ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated last year
- ☆12Updated 2 years ago
- ☆15Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆27Updated last month
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- ☆20Updated 7 months ago
- ☆23Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆20Updated 4 years ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- The tools are used for displaying hic signal of genome☆23Updated 4 years ago
- ☆23Updated 3 years ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated 10 months ago
- ☆21Updated last year
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- ☆12Updated 5 years ago
- Construct and Analyze the North American Vitis pangenome☆22Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 5 years ago
- ☆15Updated 3 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆35Updated 2 months ago
- Script to help assessing the evolutionary history of a TE family☆16Updated 5 years ago
- ☆27Updated 2 years ago
- ☆16Updated 2 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- Automated pipeline for running CoalHMM☆12Updated last year