Alternatives and similar repositories for HFKReads

Users that are interested in HFKReads are comparing it to the libraries listed below

• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated 2 months ago
• jkimlab / DESCHRAMBLER
  ☆23Updated last year
• tangerzhang / calc_switchErr
  ☆27Updated last month
• wangziwei08 / LTR-insertion-time-estimation
  ☆15Updated 2 years ago
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 9 months ago
• lardo / khaper
  ☆27Updated 2 years ago
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated last year
• cchauve / ANGeS
  Reconstruction of ancestral genome maps
  ☆16Updated 7 years ago
• rivasiker / autocoalhmm
  Automated pipeline for running CoalHMM
  ☆13Updated last year
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆29Updated 3 months ago
• shingocat / syntenyPlotByR
  plot genome alignment synteny
  ☆21Updated 4 years ago
• yilinZhang-bio / Watermelon-pangenome
  ☆22Updated last year
• rpianezza / GenomeDelta
  Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…
  ☆17Updated 5 months ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 5 years ago
• BGI-Qingdao / TGS-GapCloser2
  A gap-closing software tool that uses long reads to enhance genome assembly.
  ☆11Updated last year
• xiekunwhy / kmerDedup
  Reduce genome assembly redundancy using shared mapped k-mer method.
  ☆13Updated 2 weeks ago
• LQHHHHH / paml-yn00-run-pipeline
  A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method
  ☆9Updated 2 months ago
• Kirovez / pyTanFinder
  Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results
  ☆12Updated 6 years ago
• liushoucheng / SPART
  a Semi-automated pipeline for assembling T2T genome
  ☆17Updated 3 weeks ago
• NBISweden / TransposonPSI
  TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…
  ☆13Updated 5 years ago
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆23Updated last year
• LAILAB-CAU / update-Mo17
  ☆24Updated 2 years ago
• ChenHuaLab / Beta-PSMC
  ☆12Updated 5 years ago
• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆19Updated 2 weeks ago
• SexGenomicsToolkit / PSASS
  Pooled Sequencing Analysis for Sex Signal
  ☆11Updated 3 years ago
• YaoZhou89 / WGSc
  ☆15Updated 3 years ago
• ShuaiNIEgithub / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆18Updated last year