Tools for the analysis of structural variation in genomes
☆81Feb 23, 2026Updated 5 months ago
Alternatives and similar repositories for SVanalyzer
Users that are interested in SVanalyzer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Structural variant toolkit for VCFs☆422May 22, 2026Updated 2 months ago
- ☆85Mar 3, 2025Updated last year
- Toolset for SV simulation, comparison and filtering☆424Dec 1, 2023Updated 2 years ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆31Sep 19, 2022Updated 3 years ago
- Jasmine: SV Merging Across Samples☆260Dec 20, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- for visual evaluation of read support for structural variation☆55Jun 4, 2024Updated 2 years ago
- Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls☆46Jan 26, 2022Updated 4 years ago
- Toolkit for calling structural variants using short or long reads☆115Jul 14, 2026Updated last month
- A method for variant graph genotyping based on exact alignment of k-mers☆88Apr 1, 2019Updated 7 years ago
- Structural variant (SV) analysis tools☆41Jul 1, 2024Updated 2 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated 11 months ago
- Graph realignment tools for structural variants☆170Dec 8, 2022Updated 3 years ago
- ☆11Dec 9, 2022Updated 3 years ago
- Structural variant caller☆54Dec 8, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆32Nov 25, 2019Updated 6 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆49Jun 2, 2020Updated 6 years ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆265Jun 17, 2024Updated 2 years ago
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- RTG Tools: Utilities for accurate VCF comparison and manipulation☆337May 27, 2025Updated last year
- ☆51Aug 27, 2019Updated 6 years ago
- Support Vector Structural Variation Genotyper☆59May 29, 2020Updated 6 years ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆19Aug 6, 2025Updated last year
- Structural variation and indel detection by local assembly