vgteam / sv-genotyping-paperLinks
☆31Updated 5 years ago
Alternatives and similar repositories for sv-genotyping-paper
Users that are interested in sv-genotyping-paper are comparing it to the libraries listed below
Sorting:
- ☆43Updated last year
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- SV calling for diploid assemblies☆29Updated last year
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated 2 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- ☆31Updated 9 months ago
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- Draw a dot plot from a paf alignment☆34Updated last month
- Tool for globally phasing diploid assembly graphs with orthogonal data☆41Updated 11 months ago
- ☆37Updated 2 years ago
- ☆31Updated last year
- A Hi-C scaffolding method☆22Updated 3 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆26Updated 4 months ago
- ☆36Updated 3 months ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- SV genotyper for long reads with a variation graph☆13Updated 2 months ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- ☆28Updated 6 months ago
- ☆36Updated last year
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- ☆38Updated 3 weeks ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆34Updated 2 years ago