A method for variant graph genotyping based on exact alignment of k-mers
☆88Apr 1, 2019Updated 7 years ago
Alternatives and similar repositories for BayesTyper
Users that are interested in BayesTyper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Graph realignment tools for structural variants☆168Dec 8, 2022Updated 3 years ago
- Population-scale genotyping using pangenome graphs☆201Jan 9, 2025Updated last year
- Genome inference from a population reference graph☆96Apr 1, 2025Updated last year
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆34Aug 18, 2025Updated 10 months ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Apr 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- calling SVs from Blasr contig level alignments☆54Mar 9, 2018Updated 8 years ago
- ☆16Jan 10, 2022Updated 4 years ago
- Toolset for SV simulation, comparison and filtering☆424Dec 1, 2023Updated 2 years ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Mar 12, 2018Updated 8 years ago
- alignment to variation graph inducer☆161Jun 17, 2026Updated 3 weeks ago
- Tools for the analysis of structural variation in genomes☆81Feb 23, 2026Updated 4 months ago
- NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on r…