Params validation plugin for Nextflow pipelines
☆48Aug 7, 2024Updated last year
Alternatives and similar repositories for nf-validation
Users that are interested in nf-validation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆56Jul 7, 2026Updated 2 weeks ago
- nf-test utility functions☆12May 22, 2026Updated last month
- Simple test framework for Nextflow pipelines☆189Apr 27, 2026Updated 2 months ago
- A proof of concept daisy-chaining Nextflow workflows☆34Mar 10, 2026Updated 4 months ago
- This repository hosts a large collection of Nextflow snippets☆56Jan 26, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Experimental features for Nextflow☆51Dec 30, 2025Updated 6 months ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 7 months ago
- Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-C…☆30May 17, 2026Updated 2 months ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 3 months ago
- Customer workshop materials☆19May 13, 2026Updated 2 months ago
- SQL support plugin for Nextflow☆32Sep 15, 2025Updated 10 months ago
- ☆13Mar 12, 2020Updated 6 years ago
- Repository to host tool-specific module files for the Nextflow DSL2 community!☆421Updated this week
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Access nextflow variables from python scripts or notebooks☆20Apr 11, 2021Updated 5 years ago
- Nextflow language support for Visual Studio Editor☆38Updated this week
- Test data to be used for automated testing with the nf-core pipelines☆164Updated this week
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 17, 2023Updated 2 years ago
- Generation and updating of protein families☆22Updated this week
- A GitHub action to install Nextflow☆31Updated this week
- Pipeline for identifying, annotation, and quantifying phage sequences in (meta)-genomic sequences.☆19Jun 3, 2025Updated last year
- Stochastic Testing and Input Manipulation for Unbiased Learning Systems☆31Apr 30, 2026Updated 2 months ago
- A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis☆11May 9, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Nextflow training material☆257Updated this week
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated last year
- Linter rules for Nextflow DSL scripts☆34May 25, 2026Updated last month
- Workflow management with Nextflow and nf-core☆32Jan 21, 2025Updated last year
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆36May 29, 2026Updated last month
- Python package with helper tools for the nf-core community.☆317Updated this week
- Testing building mulled containers for multi-requirement tools.☆85Updated this week
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆29Jul 6, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆60Jun 22, 2026Updated 3 weeks ago
- Web application to collect and visualise data across multiple MultiQC runs.☆95Dec 13, 2024Updated last year
- ☆15Apr 2, 2025Updated last year
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- FunctionaL Omics Processing platform☆13Jul 25, 2024Updated last year
- UMCU Genetics Nextflow modules☆30Oct 25, 2024Updated last year
- The Nextflow language server☆31Updated this week