seqeralabs / nf-training-advancedLinks
Customer workshop materials
☆19Updated 2 years ago
Alternatives and similar repositories for nf-training-advanced
Users that are interested in nf-training-advanced are comparing it to the libraries listed below
Sorting:
- k-mer similarity analysis pipeline☆23Updated 2 months ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆27Updated last month
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 2 months ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Updated 3 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 6 months ago
- fastest GTF/GFF-to-BED converter chilling around☆29Updated 2 weeks ago
- UMCU Genetics Nextflow modules☆29Updated last year
- ☆22Updated 2 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Fast sequencing data quality metrics☆31Updated 4 months ago
- Variant catalogue pipeline☆26Updated this week
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated 2 years ago
- Demonstrating best practices for bioinformatics command line tools☆25Updated 5 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago
- Master of Pores 2☆23Updated last year
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- A Nextflow pipeline for running synteny analysis.☆16Updated 7 months ago
- Automated Detection and Qualification of Differential Methylation☆16Updated 2 years ago
- Linter rules for Nextflow DSL scripts☆33Updated last week
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- Docker containers for bioinformatics with a small footprint☆23Updated last month
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Updated 7 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- add true-negative SVs from a population callset to a truth-set.☆15Updated 3 years ago
- CLI to automate Nextflow pipeline testing☆12Updated last month
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago