seqeralabs / nf-training-advanced
Customer workshop materials
☆17Updated last year
Alternatives and similar repositories for nf-training-advanced:
Users that are interested in nf-training-advanced are comparing it to the libraries listed below
- k-mer similarity analysis pipeline☆20Updated 3 weeks ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆18Updated 10 months ago
- Python Primer Design Library☆12Updated last week
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated 2 weeks ago
- ☆21Updated last year
- A VSCode extension pack for nf-core developers.☆14Updated 4 months ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Updated 2 years ago
- ☆15Updated last year
- Automatically source dotenv files into your Nextflow scope☆9Updated 3 weeks ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆20Updated 3 months ago
- Nascent Transcription Processing Pipeline☆18Updated 3 weeks ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- Fast sequencing data quality metrics☆20Updated last week
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆15Updated 2 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 3 months ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆31Updated last week
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated last year
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆43Updated 2 years ago
- Search for a set of compatible indexes for your sequencing experiment☆11Updated 5 years ago
- Params validation plugin for Nextflow pipelines☆48Updated 6 months ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated 5 months ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A command line tool to compute mapping statistics from a BAM file☆23Updated 2 years ago
- ☆10Updated last week
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 2 months ago
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆28Updated this week