Alternatives and similar repositories for omicsgenetraitassociation:

Users that are interested in omicsgenetraitassociation are comparing it to the libraries listed below

• derijkp / scywalker
  A program for the analysis of single cell nanopore long read data
  ☆18Updated last month
• ConesaLab / acorde
  Isoform co-usage networks from single-cell RNA-seq data
  ☆16Updated last year
• complextissue / pytximport
  Feature-rich Python implementation of the tximport package for gene count estimation.
  ☆36Updated last month
• homeveg / nuctools
  software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data
  ☆17Updated 5 years ago
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆16Updated 3 years ago
• IrinaVKuznetsova / CirGO
  ☆21Updated 11 months ago
• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• mortazavilab / cerberus
  ☆19Updated 8 months ago
• mehdiborji / nanoranger
  simplified cellranger for long-read data
  ☆18Updated last week
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 2 weeks ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆32Updated last month
• ay-lab / HiCnv
  HiCnv is used to call copy number variations and breakpoints from Hi-C data
  ☆21Updated last year
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• tgen / bisbee
  alternative splicing analysis pipeline
  ☆18Updated 4 years ago
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆35Updated this week
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆39Updated 2 years ago
• TRON-Bioinformatics / splice2neo
  R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes
  ☆14Updated last week
• AmpliconSuite / AmpliconReconstructorOM
  Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
  ☆17Updated last year
• akiomiyao / tef
  Transposable Element Finder - Detection of active transposable elements from NGS data
  ☆9Updated this week
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 6 years ago
• Vivianstats / MAAPER
  Model-based analysis of APA using 3' end-linked reads
  ☆9Updated 3 years ago
• Oshlack / Slinker
  Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.
  ☆19Updated 2 years ago
• a2iEditing / deNovo-Detect
  ☆12Updated 2 years ago
• cortes-ciriano-lab / ReConPlot
  ☆22Updated 4 months ago
• Xinglab / rMATS-long
  ☆28Updated 4 months ago
• LosicLab / starchip
  Detection of Circular RNA and Fusions from RNA-Seq
  ☆32Updated 6 years ago
• Genentech / Isosceles
  The Isoforms from Single-Cell; Long-read Expression Suite
  ☆27Updated 3 months ago
• broadinstitute / longbow
  Annotation and segmentation of MAS-seq data
  ☆20Updated last year
• parklab / HiNT
  HiC for copy Number variation and Translocation detection
  ☆38Updated 3 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 5 years ago