Alternatives and similar repositories for nextflow-utility-services:

Users that are interested in nextflow-utility-services are comparing it to the libraries listed below

• seqeralabs / nf-training-advanced
  Customer workshop materials
  ☆17Updated last year
• nextflow-io / nf-prov
  ☆28Updated 2 weeks ago
• nextflow-io / vscode-language-nextflow
  Nextflow language support for Visual Studio Editor
  ☆34Updated last week
• Midnighter / nextflow-gotchas
  A collection of unexpected challenges and learnings with nextflow and nf-core.
  ☆34Updated last year
• nextflow-io / nf-validation
  Params validation plugin for Nextflow pipelines
  ☆48Updated 6 months ago
• nf-core / vscode-extensionpack
  A VSCode extension pack for nf-core developers.
  ☆14Updated 4 months ago
• seqeralabs / wave-showcase
  Examples showing how to configure Nextflow to run with Wave containers provisioning service
  ☆20Updated 3 months ago
• fulcrumgenomics / nf-dotenv
  Automatically source dotenv files into your Nextflow scope
  ☆9Updated 3 weeks ago
• rhpvorderman / sequali
  Fast sequencing data quality metrics
  ☆20Updated last week
• grst / nxfvars
  Access nextflow variables from python scripts or notebooks
  ☆21Updated 3 years ago
• seqeralabs / seqera-kit
  Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
  ☆28Updated this week
• nf-core / tower-action
  GitHub Action to launch a workflow using Nextflow Tower.
  ☆12Updated last year
• bentsherman / nf-boost
  Experimental features for Nextflow
  ☆38Updated last month
• mribeirodantas / NextflowSnippets
  This repository hosts a large collection of Nextflow snippets
  ☆57Updated 3 weeks ago
• telatin / covtobed
  ⛰ covtobed | Convert the coverage track from a BAM file into a BED file
  ☆43Updated 2 years ago
• nextflow-io / nf-schema
  Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
  ☆18Updated this week
• nf-core / detaxizer
  A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…
  ☆14Updated 3 weeks ago
• nf-core / setup-nextflow
  A GitHub action to install Nextflow
  ☆15Updated this week
• rpetit3 / fastq-scan
  Output FASTQ summary statistics in JSON format
  ☆29Updated 2 years ago
• peterk87 / sublime-nextflow
  Nextflow workflow syntax highlighting and snippets for Sublime Text 4
  ☆24Updated last month
• nf-core / readsimulator
  A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.
  ☆27Updated 3 weeks ago
• Arcadia-Science / seqqc
  A Nextflow pipeline to identify quality control issues with new sequencing data.
  ☆28Updated 2 years ago
• nf-core / variantbenchmarking
  A nextflow variant benchmarking pipeline - premature
  ☆14Updated this week
• mahesh-panchal / nf-cascade
  A proof of concept daisy-chaining Nextflow workflows
  ☆17Updated last month
• nf-core / kmermaid
  k-mer similarity analysis pipeline
  ☆20Updated 3 weeks ago
• beardymcjohnface / Snaketool
  Cookiecutter profile for making a Snakemake-based bioinformatics tool, but without the fluff
  ☆46Updated last year
• micans / nextflow-idioms
  Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.
  ☆16Updated 11 months ago
• Wytamma / snk
  Snakemake workflow management system and CLI generation tool
  ☆52Updated 3 weeks ago
• nf-core / multiplesequencealign
  A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.
  ☆27Updated this week
• PF2-pasteur-fr / checkMyIndex
  Search for a set of compatible indexes for your sequencing experiment
  ☆11Updated 5 years ago