nextflow-io / nf-prov
☆30Updated this week
Alternatives and similar repositories for nf-prov
Users that are interested in nf-prov are comparing it to the libraries listed below
Sorting:
- Params validation plugin for Nextflow pipelines☆48Updated 9 months ago
- Testing building mulled containers for multi-requirement tools.☆72Updated this week
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Updated 6 months ago
- Reference genome resource manager☆76Updated last year
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆40Updated this week
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆29Updated this week
- This repository hosts a large collection of Nextflow snippets☆57Updated 3 months ago
- Nextflow workflow syntax highlighting and snippets for Sublime Text 4☆24Updated 4 months ago
- vembrane filters VCF records using python expressions☆58Updated 2 weeks ago
- Web application to collect and visualise data across multiple MultiQC runs.☆97Updated 5 months ago
- Nextflow language support for Visual Studio Editor☆34Updated this week
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆28Updated this week
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- A VSCode extension pack for nf-core developers.☆15Updated 2 months ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated last week
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Updated 2 years ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆37Updated last year
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆30Updated 2 weeks ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 3 years ago
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated this week
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆16Updated last month
- Fast sequencing data quality metrics☆26Updated last month
- A collection of modules and sub-workflows for Nextflow☆26Updated last week
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆69Updated this week
- Get, parse, and extract information from the SRA metadata files☆38Updated 2 years ago
- A proof of concept daisy-chaining Nextflow workflows☆24Updated this week
- ☆9Updated 6 months ago
- Experimental features for Nextflow☆44Updated last month
- BigWig and BAM utilities☆96Updated last year
- TIDDIT - structural variant calling☆73Updated last month