nextflow-io / doomLinks
A Nextflow pipeline to play Doom
☆10Updated 2 months ago
Alternatives and similar repositories for doom
Users that are interested in doom are comparing it to the libraries listed below
Sorting:
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Structural variant (SV) analysis tools☆40Updated last year
- Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery☆12Updated last week
- Animated GIF of flow cell performance from sequencing summary file.☆13Updated 7 years ago
- A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets☆13Updated last week
- Params validation plugin for Nextflow pipelines☆48Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆38Updated 9 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Updated 2 years ago
- Structural Variant Index☆75Updated last year
- A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…☆23Updated 2 months ago
- Approach to identify simple and complex structural genomic rearrangements using a randomized approach☆21Updated 7 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆50Updated this week
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆42Updated this week
- ☆33Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- Easy genomic regions for short-read variant calling☆45Updated 4 months ago
- Automated Detection and Qualification of Differential Methylation☆16Updated 2 years ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆38Updated 2 weeks ago
- Config and setup to run nf-core/raredisease pipeline☆10Updated 4 months ago
- A bioinformatics pipeline to phase and impute genetic data☆27Updated 2 weeks ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆39Updated 2 months ago
- REINDEER REad Index for abuNDancE quERy☆56Updated 7 months ago
- Population-wide Deletion Calling☆35Updated 9 months ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Updated 6 years ago
- ☆44Updated last year
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated last year
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆39Updated last month
- A nextflow pipeline for calling exome CNVs☆13Updated 3 weeks ago