netbiolab / scHumanNetLinks
Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
☆43Updated last week
Alternatives and similar repositories for scHumanNet
Users that are interested in scHumanNet are comparing it to the libraries listed below
Sorting:
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 5 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated this week
- ☆39Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 3 months ago
- ☆29Updated 2 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 9 months ago
- ☆19Updated 4 months ago
- ☆29Updated 5 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆54Updated 2 years ago
- scWGCNA☆61Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 7 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆37Updated 3 weeks ago
- ☆58Updated last year
- ☆35Updated 5 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 2 months ago
- Single-cell Mutual Information-based Network Engineering Ranger☆20Updated 2 weeks ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆41Updated 3 years ago
- R package IReNA☆28Updated 9 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated 3 months ago
- ☆24Updated 3 months ago
- Code related to scRNA analysis using the scAmpi workflow☆27Updated 2 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago