netbiolab / scHumanNetLinks
Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
☆43Updated last month
Alternatives and similar repositories for scHumanNet
Users that are interested in scHumanNet are comparing it to the libraries listed below
Sorting:
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆58Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆39Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 4 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- scWGCNA☆61Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆37Updated 6 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Single-cell Case Control Analysis☆52Updated this week
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- ☆19Updated 3 years ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 10 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆55Updated 2 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 8 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated 2 weeks ago
- ☆43Updated 4 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 7 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆29Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- ☆11Updated 11 months ago
- BioTIP: Biological Tipping-Point Identification and Characterization☆22Updated 3 months ago