JialongJiang / DSPINLinks
Code and example of the D-SPIN framework
☆22Updated this week
Alternatives and similar repositories for DSPIN
Users that are interested in DSPIN are comparing it to the libraries listed below
Sorting:
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆34Updated last year
- ACTIONet single-cell analysis framework☆41Updated 8 months ago
- ☆13Updated 5 years ago
- ☆10Updated last year
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆23Updated 5 months ago
- ☆14Updated 2 months ago
- ☆25Updated last week
- Single Cell Consensus Clustering with Speed☆20Updated 2 years ago
- ☆23Updated 3 weeks ago
- Spatial reconstruction of dissociated single-cell data☆17Updated last year
- Variant impact phenotyping using Perturb-seq☆9Updated last year
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆14Updated 7 months ago
- Using BCR and expression for sequence embedding☆22Updated this week
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated 9 months ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆18Updated 3 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Benchmark of GRNs using the GRETA pipeline☆24Updated 2 months ago
- RNA velocity validation☆22Updated 3 years ago
- Molecular interactions inference from single-cell multi-omics data☆24Updated 2 weeks ago
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆29Updated 2 months ago
- Code for scKINETICS (ISMB 2023)☆21Updated last year
- ☆26Updated last week
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- ☆15Updated 3 years ago
- ☆16Updated 10 months ago
- Information-based dimensionality reduction☆29Updated 5 months ago
- ☆25Updated 3 years ago