crazyhottommy / single-cell-DNAseq-notesLinks
☆16Updated 3 years ago
Alternatives and similar repositories for single-cell-DNAseq-notes
Users that are interested in single-cell-DNAseq-notes are comparing it to the libraries listed below
Sorting:
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆25Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Code for EpiMap data browser☆14Updated last year
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆17Updated 2 years ago
- Advanced steps of the OSCA book☆13Updated this week
- ☆17Updated last year
- Single-cell RNA Processing Software☆11Updated 4 months ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆12Updated 3 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 6 months ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- HOT regions paper☆11Updated 6 years ago
- ☆12Updated 5 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- ☆12Updated 4 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)☆17Updated 5 years ago
- ☆16Updated 2 years ago
- ☆14Updated 6 years ago
- ChromSCape☆14Updated 2 months ago
- SCASA: Single cell transcript quantification tool☆22Updated last year
- ☆12Updated 6 years ago
- ☆18Updated 2 years ago
- ☆18Updated 4 years ago