crazyhottommy / single-cell-DNAseq-notesLinks
☆16Updated 2 years ago
Alternatives and similar repositories for single-cell-DNAseq-notes
Users that are interested in single-cell-DNAseq-notes are comparing it to the libraries listed below
Sorting:
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆23Updated 2 years ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆11Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Single-cell RNA Processing Software☆11Updated 3 weeks ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- omics data analysis using clusterProfiler ;)☆13Updated last year
- Advanced steps of the OSCA book☆13Updated 3 months ago
- ☆11Updated 5 years ago
- ☆16Updated 2 years ago
- ☆17Updated 11 months ago
- ☆12Updated 4 years ago
- BioCarta pathway images☆11Updated last year
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Docker container for genomics analyses in R.☆25Updated last year
- HOT regions paper☆11Updated 6 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆18Updated 4 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- ☆14Updated 6 years ago
- ☆20Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- ☆12Updated 5 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- ☆16Updated 2 years ago