crazyhottommy / single-cell-DNAseq-notes
☆15Updated 2 years ago
Alternatives and similar repositories for single-cell-DNAseq-notes:
Users that are interested in single-cell-DNAseq-notes are comparing it to the libraries listed below
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- omics data analysis using clusterProfiler ;)☆13Updated 9 months ago
- Advanced steps of the OSCA book☆12Updated this week
- Pairwise Hierarchical Model☆17Updated 3 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- ☆12Updated 3 years ago
- ☆17Updated 8 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Single-cell RNA Processing Software☆11Updated 5 months ago
- ☆23Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- SCASA: Single cell transcript quantification tool☆20Updated last year
- ☆20Updated last year
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 8 months ago
- HOT regions paper☆11Updated 5 years ago
- ☆15Updated last year
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆11Updated last week
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated 2 years ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface☆16Updated 4 years ago
- ☆16Updated 2 years ago
- Analyzing chromatin accessibility data in R☆18Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆17Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 8 months ago
- ChromSCape☆14Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago