crazyhottommy / single-cell-DNAseq-notesLinks
☆16Updated 2 years ago
Alternatives and similar repositories for single-cell-DNAseq-notes
Users that are interested in single-cell-DNAseq-notes are comparing it to the libraries listed below
Sorting:
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- ☆11Updated 5 years ago
- omics data analysis using clusterProfiler ;)☆13Updated last year
- Advanced steps of the OSCA book☆13Updated 3 months ago
- HOT regions paper☆11Updated 6 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Code for EpiMap data browser☆14Updated last year
- Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)☆17Updated 5 years ago
- ☆17Updated 2 years ago
- ☆23Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- ☆17Updated last year
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆11Updated 3 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- scover☆23Updated last year
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆11Updated 3 months ago
- ☆14Updated 6 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 3 months ago
- Single-cell RNA Processing Software☆11Updated last month
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆20Updated last year
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆13Updated 2 months ago
- Pairwise Hierarchical Model☆19Updated 3 years ago
- ☆16Updated 2 years ago
- ☆18Updated 4 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago