☆17Sep 28, 2022Updated 4 years ago
Alternatives and similar repositories for single-cell-DNAseq-notes
Users that are interested in single-cell-DNAseq-notes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Dec 8, 2021Updated 4 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 5 years ago
- snakemake workflow for post-processing scATACseq data☆23Jul 15, 2020Updated 6 years ago
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- Human brain, >200,000 nuclei☆25Jun 17, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tidyverse and grammar of graphics powered line traces visualizer☆31Sep 3, 2025Updated last year
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Analysis of cell-cell communication at single-cell resolution☆108Sep 10, 2024Updated 2 years ago
- ☆26Dec 5, 2025Updated 10 months ago
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆23Feb 1, 2024Updated 2 years ago
- Blood Transcription Modules for interpreting blood transcriptomics data☆11Nov 25, 2024Updated last year
- Interactive software tool for the assignment of cell types in single-cell studies.☆34Apr 14, 2023Updated 3 years ago
- Tutorials contain live coding and script for R programming in Bangla☆16Oct 4, 2019Updated 7 years ago
- scWGCNA☆66Nov 8, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Oct 1, 2026Updated last week
- marker-based purification of cell types from single-cell RNA-seq datasets☆145Mar 13, 2026Updated 6 months ago
- Docker container for genomics analyses in R.☆28Apr 29, 2024Updated 2 years ago
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 7 years ago
- A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping☆30Aug 27, 2026Updated last month
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆42Aug 23, 2023Updated 3 years ago
- Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome☆231Feb 4, 2026Updated 8 months ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆106Jul 23, 2026Updated 2 months ago
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19☆79Jan 13, 2026Updated 8 months ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆51Updated this week
- ☆31Apr 5, 2025Updated last year
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- ATAC-seq snakemake pipeline☆90Feb 13, 2020Updated 6 years ago
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆23May 21, 2024Updated 2 years ago
- ☆19Apr 20, 2025Updated last year
- R package for the identification of functionally important subnetworks☆14May 6, 2024Updated 2 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆23Nov 10, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆75Oct 10, 2024Updated 2 years ago
- SCCNV: a software tool for identifying copy number variation from single-cell whole-genome sequencing☆13Jul 21, 2020Updated 6 years ago
- Inference of TCR motifs☆33Jun 17, 2025Updated last year
- ☆22Jul 17, 2024Updated 2 years ago
- HOT regions paper☆11Jun 18, 2019Updated 7 years ago
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆16Apr 7, 2026Updated 6 months ago