Lung cancer 10X analysis
☆11Dec 30, 2020Updated 5 years ago
Alternatives and similar repositories for inferCC
Users that are interested in inferCC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- bioinformatics R test code☆15May 29, 2026Updated 5 months ago
- ☆13May 25, 2025Updated last year
- Code repository for single cell RNA-seq☆42Oct 12, 2020Updated 6 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 6 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆38Jan 3, 2025Updated last year
- An R package of functions for single cell -omics analysis.☆11Jul 18, 2023Updated 3 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆30Mar 2, 2020Updated 6 years ago
- Notebooks for reproducing figures in the Spectra paper☆13Jun 7, 2023Updated 3 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆26Mar 7, 2020Updated 6 years ago
- scEntropy method and scEGMM framework☆18Oct 26, 2019Updated 7 years ago
- ☆16May 13, 2022Updated 4 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆64Jul 22, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code to reproduce TNBC analysis and figures☆25Jun 13, 2022Updated 4 years ago
- ☆13Mar 19, 2024Updated 2 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Oct 13, 2026Updated 2 weeks ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- ☆24Mar 22, 2023Updated 3 years ago
- ☆28Sep 20, 2023Updated 3 years ago
- An energy landscape-based approach for measuring developmental states and inferring cellular trajectories from single cell RNA-seq data☆18Feb 17, 2021Updated 5 years ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jul 6, 2026Updated 3 months ago
- Fast phenograph, CyTOF☆26Aug 19, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆18Mar 10, 2026Updated 7 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- Tool to parse fasterq/fastq dump outputs for SRA scRNAseq data☆19Mar 7, 2024Updated 2 years ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆140Sep 6, 2024Updated 2 years ago
- ☆14Apr 22, 2021Updated 5 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 5 years ago
- GENOT: Generative Neural Optimal Transport☆19Dec 18, 2024Updated last year
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- ☆18Nov 5, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Jun 7, 2024Updated 2 years ago
- Code and metadata for glioblastoma matched analysis☆10Jan 19, 2019Updated 7 years ago
- scSNV Mapping tool for 10X Single Cell Data☆26Dec 19, 2025Updated 10 months ago
- Methylation array analysis pipeline for CPTAC☆10Sep 1, 2022Updated 4 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- CeSpGRN: Inferring cell specific GRN using single-cell gene expression data☆23Mar 23, 2026Updated 7 months ago