data2intelligence / CytoSig_predictionLinks
Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
☆12Updated last year
Alternatives and similar repositories for CytoSig_prediction
Users that are interested in CytoSig_prediction are comparing it to the libraries listed below
Sorting:
- ☆15Updated 3 years ago
- ☆17Updated 9 months ago
- ☆10Updated last month
- ☆10Updated 8 months ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆14Updated 6 months ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- HTCA Analysis Tools☆6Updated 2 years ago
- ☆20Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆9Updated this week
- Gene Expression Decomposition and Integration☆17Updated 4 months ago
- ☆16Updated 4 years ago
- Code used to process the data of the HBCA project☆28Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 8 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆16Updated 2 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- single cell Gene co-Expression Network Analysis☆9Updated 2 years ago
- Functional Annotation for Single-Cell Transcriptomics☆10Updated 11 months ago
- A collection of perl scripts for NGS analysis☆16Updated 8 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆12Updated last year
- A tissue-specific single-cell biological age model☆11Updated last year
- ☆14Updated 3 months ago
- ☆10Updated 3 years ago
- ☆25Updated last year
- ☆12Updated 5 years ago
- Computational pipeline to process EasySci-RNA data.☆20Updated last year