ruppinlab / PERCEPTION
Utilizing single-cell omics from patients tumor to predict response and resistance.
☆63Updated last year
Alternatives and similar repositories for PERCEPTION:
Users that are interested in PERCEPTION are comparing it to the libraries listed below
- ☆40Updated last year
- ☆30Updated 2 years ago
- Gene group activity utility functions for Scanpy☆69Updated 2 months ago
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆51Updated 4 months ago
- R package for the analysis of single-cell immune repertoires☆42Updated last month
- R package for Pathway RespOnsive GENe activity inference☆100Updated 2 years ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- Predict RNA velocity through deep learning☆66Updated last year
- Spatial transcriptomics of heart tissue☆81Updated last year
- Immunology-related bioinformatics data and tools☆72Updated 10 months ago
- Materials and scripts for building cell type encyclopedia table☆19Updated 2 months ago
- ☆53Updated 2 years ago
- Code and documentation for the curation of cellxgene datasets☆41Updated this week
- Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration☆87Updated this week
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆62Updated 2 years ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆54Updated 10 months ago
- Multi-modal single cell analysis pipelines☆57Updated this week
- A docker image for single-cell analysis☆81Updated last month
- Single cell omics biology annotations☆50Updated this week
- ☆19Updated 7 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆89Updated last week
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- This repository contains all code used for the Human Lung Cell Atlas project.☆49Updated last year
- Tools used in Human Cell Landscape(HCL)☆54Updated 4 years ago
- Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey a…☆142Updated 2 weeks ago
- ☆54Updated last year
- ☆53Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- R implementation of GeneTrajectory☆53Updated 11 months ago
- A tool for semi-automatic cell type harmonization and integration☆102Updated last year