☆14May 2, 2025Updated last year
Alternatives and similar repositories for ont-spectre
Users that are interested in ont-spectre are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Copy number caller for long read data including SNV utilization☆69Mar 31, 2025Updated last year
- Tandem repeat genotyping with long reads☆38Sep 23, 2025Updated 9 months ago
- ☆36Aug 18, 2024Updated last year
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆92May 11, 2026Updated last month
- Automated Detection and Qualification of Differential Methylation☆16Nov 21, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Short Tandem Repeat disease loci resource☆29Updated this week
- Detect and phase minor SNVs from long-read sequencing data☆14Dec 28, 2021Updated 4 years ago
- ☆22Nov 24, 2025Updated 7 months ago
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 7 months ago
- ☆24Feb 22, 2023Updated 3 years ago
- Tandem repeat expansion detection or genotyping from long-read alignments☆162Mar 25, 2026Updated 3 months ago
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 4 years ago
- Minotour API, web and client code☆30Mar 28, 2026Updated 3 months ago
- Somatic structural variant caller for long-read data☆92Jun 18, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Mar 17, 2023Updated 3 years ago
- ☆171Jan 22, 2026Updated 5 months ago
- A bioinformatics tool for working with modified bases☆269Jun 12, 2026Updated 3 weeks ago
- CoRAL: Reconstruction of focal amplifications with long reads☆31Jun 28, 2026Updated last week
- ☆129Jun 25, 2026Updated last week
- SV calling for diploid assemblies☆32Mar 22, 2024Updated 2 years ago
- ☆30Mar 1, 2026Updated 4 months ago
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 5 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆49Oct 22, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Normalization for single cell RNA-seq data☆10Aug 25, 2022Updated 3 years ago
- ☆53Sep 27, 2025Updated 9 months ago
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆256Jun 5, 2026Updated last month
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Aug 1, 2024Updated last year
- SV detection tool for nanopore sequence reads☆97Mar 25, 2026Updated 3 months ago
- Tumor-normal variant calling workflow using HiFi reads☆31Mar 4, 2026Updated 4 months ago
- A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution☆45Mar 12, 2025Updated last year
- TREDPARSE: HLI Short Tandem Repeat (STR) caller☆25Aug 20, 2020Updated 5 years ago
- CReSIL: Accurate Identification of Extrachromosomal Circular DNA from Long-read Sequences☆13Aug 21, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- HiFi-based caller for highly similar paralogous genes☆69Jun 10, 2026Updated 3 weeks ago
- Better Alignments with Translated HMMER☆26Jun 15, 2026Updated 2 weeks ago
- ☆37Mar 31, 2026Updated 3 months ago
- BayesTME: A reference-free Bayesian method for analyzing spatial transcriptomics data☆14Apr 29, 2025Updated last year
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆186Updated this week
- Infering ancestral synteny with hierarchical orthologous groups☆38Jun 26, 2026Updated last week
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆32Nov 25, 2024Updated last year