friend1ws / nanomonsvLinks
SV detection tool for nanopore sequence reads
☆93Updated 5 months ago
Alternatives and similar repositories for nanomonsv
Users that are interested in nanomonsv are comparing it to the libraries listed below
Sorting:
- Variant calling tool for long-read sequencing data☆111Updated 6 months ago
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆69Updated last week
- Wally: Visualization of aligned sequencing reads and contigs☆117Updated 5 months ago
- A tool for somatic structural variant calling using long reads☆145Updated last month
- ClairS - a deep-learning method for long-read somatic small variant calling☆93Updated 2 months ago
- GenMap - Fast and Exact Computation of Genome Mappability☆112Updated last year
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- vcfdist: Accurately benchmarking phased variant calls☆83Updated this week
- Tandem repeat genotyping and visualization from PacBio HiFi data☆124Updated last month
- Toolkit for calling structural variants using short or long reads☆109Updated last week
- Tandem repeat expansion detection or genotyping from long-read alignments☆125Updated last week
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆78Updated 5 months ago
- SV caller for nanopore data☆92Updated 5 years ago
- RNA modifications detection from Nanopore dRNA-Seq data☆86Updated last week
- Fast and accurate coordinate conversion between assemblies☆115Updated last week
- Somatic structural variant caller for long-read data☆80Updated this week
- Research release basecalling models and configurations☆115Updated 4 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- accurate LiftOver tool for new genome assemblies☆134Updated last year
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆82Updated 2 years ago
- Structural variant caller for real-time long-read sequencing data☆57Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 4 months ago
- ☆118Updated last year
- ☆49Updated last year
- cDNA read preprocessing☆78Updated last year
- WDL workflows for variant calling and assembly using ONT☆36Updated last week
- Python programs for processing GFF3 files☆99Updated last year
- Tools to annotate genomes using long read transcriptomics data☆46Updated 4 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 4 years ago
- A complete diploid human genome☆126Updated 2 weeks ago