srbehera / FixItFelix
☆21Updated last year
Alternatives and similar repositories for FixItFelix:
Users that are interested in FixItFelix are comparing it to the libraries listed below
- Location of public benchmarking; primarily final results☆18Updated 2 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆30Updated last year
- ☆39Updated 4 months ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆35Updated 7 months ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 2 years ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- ☆39Updated 9 months ago
- PopSTR - A Population based microsatellite genotyper☆32Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆24Updated last month
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆31Updated 2 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆27Updated 6 months ago
- Short Tandem Repeat disease loci resource☆14Updated this week
- Population-wide Deletion Calling☆35Updated 4 months ago
- ☆35Updated 3 years ago
- Structural Variant Index☆71Updated last month
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆18Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆46Updated 4 years ago
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆20Updated last week
- heuristics to merge structural variant calls in VCF format.☆35Updated 8 years ago
- An insertion caller for Illumina paired-end WGS data.☆23Updated 5 months ago
- Complex structural variant visualization for HiFi sequencing data☆27Updated 2 months ago
- Structural variant (SV) analysis tools☆35Updated 6 months ago
- Variant annotation and merging pipeline☆31Updated 3 weeks ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Deep learning-based structural variant filtering method☆38Updated last year
- Working space for the GIAB TR benchmarking project☆21Updated 3 months ago
- ☆22Updated 3 years ago
- A variant caller for the GBA gene using WGS data☆21Updated 6 months ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆28Updated 3 years ago