Alternatives and similar repositories for FixItFelix:

Users that are interested in FixItFelix are comparing it to the libraries listed below

• fakedrtom / SVAFotate
  ☆39Updated 6 months ago
• Illumina / witty.er
  What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.
  ☆32Updated last year
• jbelyeu / SV-plaudit
  Pipeline for structural variant image curation and analysis.
  ☆48Updated 3 years ago
• jfarek / xatlas
  ☆29Updated 2 years ago
• kehrlab / PopDel
  Population-wide Deletion Calling
  ☆35Updated 7 months ago
• GeneDx / scramble
  ☆39Updated 11 months ago
• fritzsedlazeck / parliament2
  Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
  ☆47Updated 4 years ago
• Clinical-Genomics / stranger
  Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat
  ☆32Updated last month
• UCSC-nanopore-cgl / margin
  ☆30Updated 2 years ago
• PacificBiosciences / svpack
  Structural variant (SV) analysis tools
  ☆36Updated 9 months ago
• HudsonAlpha / CSL_public_benchmark
  Location of public benchmarking; primarily final results
  ☆18Updated last month
• mcfrith / tandem-genotypes
  ☆48Updated 9 months ago
• andrewSharo / StrVCTVRE
  StrVCTVRE, a structural variant classifier for exonic deletions and duplications
  ☆18Updated last year
• zeeev / mergeSVcallers
  heuristics to merge structural variant calls in VCF format.
  ☆36Updated 8 years ago
• 1kg-ont-vienna / sv-analysis
  SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel
  ☆25Updated 3 weeks ago
• mchowdh200 / samplot-ml
  ☆22Updated 3 years ago
• ryanlayer / stix
  Structural Variant Index
  ☆72Updated 3 months ago
• brwnj / covviz
  Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata
  ☆56Updated 3 years ago
• genomic-medicine-sweden / nallo
  An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.
  ☆25Updated this week
• schatzlab / crossstitch
  Code for phasing SVs with SNPs
  ☆52Updated 5 years ago
• ACEnglish / adotto
  Working space for the GIAB TR benchmarking project
  ☆21Updated 5 months ago
• monarch-initiative / SvAnna
  Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing
  ☆36Updated 9 months ago
• talkowski-lab / svtk
  ☆35Updated 4 years ago
• jts / smrest
  Tumour-only somatic mutation calling using long reads
  ☆26Updated 5 months ago
• PacificBiosciences / sv-benchmark
  Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data
  ☆50Updated 4 years ago
• EichlerLab / svpop
  Variant annotation and merging pipeline
  ☆32Updated last week
• hall-lab / sv-pipeline
  Pipeline for structural variation detection in cohorts
  ☆49Updated 3 years ago
• llecompte / SVJedi
  SV genotyping with long reads
  ☆40Updated last year
• DecodeGenetics / popSTR
  PopSTR - A Population based microsatellite genotyper
  ☆32Updated last year
• YingZhou001 / Immuannot
  Immuological gene typing and annotation for genome assembly
  ☆35Updated 3 weeks ago