☆23Feb 22, 2023Updated 3 years ago
Alternatives and similar repositories for FixItFelix
Users that are interested in FixItFelix are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Short Tandem Repeat disease loci resource☆27Apr 2, 2026Updated last week
- ☆10Mar 4, 2025Updated last year
- Scripts and utilities for analyzing tandem repeats (TRs).☆44Mar 31, 2026Updated last week
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]☆11Mar 6, 2024Updated 2 years ago
- SV calling for diploid assemblies☆31Mar 22, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12May 2, 2025Updated 11 months ago
- Lift-over alignments from variant-aware references☆34Mar 4, 2023Updated 3 years ago
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 4 months ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated 10 months ago
- Detect novel (and reference) STR expansions from short-read data☆71Dec 6, 2025Updated 4 months ago
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated last year
- ☆10May 31, 2022Updated 3 years ago
- Working space for the GIAB TR benchmarking project☆24Oct 24, 2024Updated last year
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆13Apr 30, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Exploration of controlled loss of quality values for compressing CRAM files☆36Feb 23, 2023Updated 3 years ago
- structural variant database software☆48Feb 16, 2026Updated last month
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆40Dec 15, 2025Updated 3 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Sep 13, 2023Updated 2 years ago
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆17Mar 26, 2026Updated 2 weeks ago
- Detect and phase minor SNVs from long-read sequencing data☆14Dec 28, 2021Updated 4 years ago
- ☆17Mar 17, 2023Updated 3 years ago
- Tandem repeat genotyping with long reads☆36Sep 23, 2025Updated 6 months ago
- Nanopanel2: a somatic variant caller for Nanopore panel sequencing data☆11Sep 21, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- vcfdist: Accurately benchmarking phased variant calls☆85Feb 23, 2026Updated last month
- Fast and accurate coordinate conversion between assemblies☆119Oct 9, 2025Updated 6 months ago
- TRGT Repeat expansion summary☆11Apr 10, 2023Updated 3 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18May 9, 2024Updated last year
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Apr 2, 2020Updated 6 years ago
- Copy number estimation and variant calling for duplicated genes using WGS.☆32Feb 24, 2026Updated last month
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jan 28, 2026Updated 2 months ago
- Codes for the Iso-Seq variant-calling paper☆11Apr 28, 2023Updated 2 years ago
- vembrane filters VCF records using python expressions☆69Mar 31, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Minimum Bait Cover Toolkit Syotti.☆15Jan 22, 2025Updated last year
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- A utility for merging and genotyping Illumina-style GVCFs.☆33Feb 26, 2019Updated 7 years ago
- A tool for estimating repeat sizes☆208Jan 30, 2024Updated 2 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated last year
- GenomeWarp translates genetic variants from one genome assembly version to another.☆97Jun 28, 2023Updated 2 years ago
- This repository hosts a large collection of Nextflow snippets☆56Jan 26, 2025Updated last year