Alternatives and similar repositories for bayNorm

Users that are interested in bayNorm are comparing it to the libraries listed below

• phillipnicol / scGBM
  Model-based Dimensionality Reduction for Single-cell RNA-seq with Generalized Bilinear Models
  ☆12Updated last month
• jacobhepkema / scover
  scover
  ☆23Updated last year
• tengfei-emory / scBatch
  Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment
  ☆17Updated 4 years ago
• pachterlab / kite
  kallisto index tag extractor
  ☆20Updated 5 years ago
• igrabski / scRNAseq-cell-type
  Probabilistic gene expression barcodes for cell type annotation
  ☆25Updated 3 years ago
• MonashBioinformaticsPlatform / celaref
  ☆14Updated 6 years ago
• single-cell-genetics / singlecell_neuroseq_paper
  Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
  ☆21Updated 11 months ago
• MSingerLab / COMETSC
  COMET Single-Cell Marker Detection tool
  ☆31Updated 2 years ago
• pachterlab / NYMP_2018
  ☆28Updated 6 years ago
• edsgard / scphaser
  R package for haplotype phasing using single-cell RNA-seq data
  ☆13Updated 7 years ago
• yuchaojiang / SCALE
  Allele-Specific Expression by Single-Cell RNA Sequencing
  ☆28Updated 4 years ago
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 5 years ago
• davemcg / scEiaD
  Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas
  ☆25Updated last year
• const-ae / transformGamPoi
  Variance stabilizing transformation for Gamma Poisson distributed data
  ☆22Updated 2 years ago
• skinnider / dismay
  Calculation of distance metrics for matrices
  ☆25Updated 6 years ago
• argschwind / TAPseq_manuscript
  Analysis code for the TAP-seq manuscript.
  ☆11Updated 3 years ago
• debsin / dropClust
  Version 2.1.0 released
  ☆23Updated 5 years ago
• cziegenhain / UMIcountR
  ☆16Updated 3 years ago
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 2 years ago
• fmicompbio / eisaR
  Exon-Intron Split Analysis (EISA) in R
  ☆16Updated last month
• cole-trapnell-lab / pseudospace
  ☆12Updated 5 years ago
• greenelab / miQC
  Flexible, probablistic metrics for quality control of scRNA-seq data
  ☆20Updated 2 years ago
• HCBravoLab / scTreeViz
  R/Bioconductor package to interactively explore single cell clusters at multiple resolutions
  ☆10Updated 3 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆18Updated 3 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 3 years ago
• csoneson / rna_velocity_quant
  Evaluation of the effect of quantification choices on RNA velocity estimates
  ☆27Updated 3 years ago
• wgmao / NIFA
  Non-negative Independent Factor Analysis for single cell RNA-seq
  ☆11Updated 3 years ago
• caleblareau / bap
  Bead-based single-cell atac processing
  ☆33Updated 3 years ago
• ScialdoneLab / COMUNET
  COMUNET: a tool to explore and visualize intercellular communication
  ☆12Updated 5 years ago
• mckennalab / SingleCellLineage
  Updated scripts and pipelines for processing GESTALT data at single-cell resolution
  ☆19Updated 4 years ago